Pairwise Alignments

Query, 187 a.a., prepilin peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., primosomal replication protein N'', putative (RefSeq) from Shewanella loihica PV-4

 Score = 57.8 bits (138), Expect = 1e-13
 Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 30/200 (15%)

Query: 16  LNELKHSAAQFDRQRGEHHRPL------FDEVLFHCHGKLLTPCVEEAH---STLQALIR 66
           L +L+    Q D Q  +  R L      F++ LF+  G  L PC+++     + L+ L++
Sbjct: 14  LKQLEQEVLQHDSQLPKGERKLLQDTERFNDNLFNQAGAQLGPCIDQLSKKIAQLEKLLQ 73

Query: 67  EKESGRLTALRAEYLSERLLAQIAAL-TRELSTQNV-----------RRNEPKPHAY--- 111
              S    AL  E + +R  A   AL T  L  ++            R+   K HA    
Sbjct: 74  GNISATTIALACEGIQDRFTALRRALNTTALGVKSAEQQKASRIAHARKRRQKSHAQSGF 133

Query: 112 ------FKKPINELYQELAQHQDWERRLMDLVRDKALLLEQASATEKAAAQQALLQSEQR 165
                      ++LY+EL +H +W       +      LE   + +K A Q  +L   +R
Sbjct: 134 NWIAAGVMNNSHQLYEELNKHMNWVHTFEQKIAHLQSKLENCHSADKIALQNEILLVHRR 193

Query: 166 LNRCREAKIKIEKRITTQER 185
           L +CR+A   IE RI   ER
Sbjct: 194 LGKCRQAISYIEDRIQAFER 213