Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., Membrane protein, putative from Pseudomonas fluorescens FW300-N2E2

 Score =  263 bits (673), Expect = 2e-75
 Identities = 127/253 (50%), Positives = 177/253 (69%), Gaps = 3/253 (1%)

Query: 5   IEPTTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAA 64
           ++ +T+ +LA+VAFIAGFIDA+AGGGG+LT PALL+ GLPPHL LGTNKL++TF S+TA+
Sbjct: 7   VDLSTLAILAVVAFIAGFIDAIAGGGGLLTTPALLTAGLPPHLVLGTNKLSSTFGSATAS 66

Query: 65  WTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTVLHRP 124
           +T+Y++KLF P  W  A + TL+GA+ G +    +  +WL K+LP+I+ A  LY +    
Sbjct: 67  FTFYKRKLFHPRQWTHALVGTLVGALTGAIVAHYLPAEWLNKMLPVIVFACGLYLLF--- 123

Query: 125 HQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLASGLA 184
             T ++      P     Q  QG  LGFYDG+AGPGTGAFWTVSS+ LY  +++ ASG+A
Sbjct: 124 GGTPKAPLDSDAPIKKTWQSPQGFSLGFYDGVAGPGTGAFWTVSSLLLYPIDLVKASGVA 183

Query: 185 KAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRPLFILVV 244
           ++MN  SN  +L  F   G +DW++GL+MG+ +M GA+ GA +AI  GA FIRP+FI VV
Sbjct: 184 RSMNFVSNIAALSVFIFSGQVDWVIGLSMGLSVMIGAFFGARTAISGGAKFIRPVFITVV 243

Query: 245 TILAGKLAYDAWW 257
             L  +LA+  W+
Sbjct: 244 LGLTVRLAWQHWF 256