Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

 Score = 62.8 bits (151), Expect = 7e-15
 Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 17/249 (6%)

Query: 8   TTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAAWTY 67
           TT  +L + AF+ G ++A+AGGG   T PAL+  G+P   A  +  LA       + W  
Sbjct: 6   TTWAILLVAAFLGGGLNAIAGGGSFFTFPALVYAGVPAVAANASGTLALLPGYFASTWG- 64

Query: 68  YRQKLFDPACWKRAFIA--TLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTV----L 121
           YR+ L  PA      +   +L G   G   +     D  R ++P ++L A L       L
Sbjct: 65  YREDLRPPATLSMGALVAISLGGGAAGAALLLTTPDDVFRAIVPWLLLVATLLFAFGPWL 124

Query: 122 HRPHQTEQSVTPEPCPKLHRKQILQGIGL---GFYDGLAGPGTGAFWTVSSMALYRFNIL 178
            R  + + +       +     ++QG  L     Y G    G G     +   L   +I 
Sbjct: 125 LRRFKRDST-------ESEANAMVQGFTLAVVSVYGGYFNGGLGIVLLAAFSLLGHRDIN 177

Query: 179 LASGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRP 238
              GL   ++      ++  +A  G I W   L M +    G YV A    R  +  +R 
Sbjct: 178 SMQGLKNLVSSVLTAIAVSVYAFGGAILWREALVMMLAATVGGYVMARVGRRLPSSLVRA 237

Query: 239 LFILVVTIL 247
           + I+  +++
Sbjct: 238 VVIVTGSVM 246