Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 83.2 bits (204), Expect = 5e-21
 Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 20/251 (7%)

Query: 11  MVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAAWTYYRQ 70
           ++L +  F+AG I+ +AGGG  LT+PAL+ +GLP  +A  TN++  T  S TA   +++ 
Sbjct: 9   LLLVVTGFLAGIINTLAGGGSNLTLPALMVMGLPAEVANATNRVGVTVQSITALLGFHKH 68

Query: 71  KLFDPACWKRAFIATLIGAILGT-LAVDAISTDWLRKVLPLIILAAALYTVLHRPHQTEQ 129
              D        + T++G  +G  LA  A ST  L K L L  +      +L RP     
Sbjct: 69  GKLDTQDKGPILLPTILGGFIGAGLAAYAPST--LIKPLLLGTMLLMALIILVRP----A 122

Query: 130 SVTPEPCPKLHRKQILQGIGL-----GFYDGLAGPGTGAFWTVSSMALYRFNILLASGLA 184
            + PE    ++R +            G Y G    G G     +     R++++ A+ L 
Sbjct: 123 IIAPELGTPVNRVKNTPSSWFWLTLAGIYGGFVQAGVGFVLLAALAGSLRYDLVRANALK 182

Query: 185 KAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFG---APFIRPLFI 241
               L     SL+ F     I WL GL     L AG  VGAH A++     +P +   F+
Sbjct: 183 VFCTLFFTLASLLVFIKEDLILWLPGL----ILAAGTMVGAHLAVKLAIKVSPKVLKWFL 238

Query: 242 LVVTILAGKLA 252
            ++T L G +A
Sbjct: 239 FLMT-LCGSVA 248