Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  276 bits (707), Expect = 2e-79
 Identities = 136/252 (53%), Positives = 179/252 (71%)

Query: 5   IEPTTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAA 64
           ++P +  +LA   FIAGFIDA+AGGGG+L++PALL++G+PPH ALGTNKLAA+F SS AA
Sbjct: 5   LDPGSWAILAATGFIAGFIDAIAGGGGLLSIPALLTIGIPPHTALGTNKLAASFGSSMAA 64

Query: 65  WTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTVLHRP 124
           +TYYR++ F P  W  A IAT IGA++GT  V  I   WL K LPL I+A ALYT+L   
Sbjct: 65  FTYYRKQFFTPRFWYHASIATFIGAVIGTFVVYLIDNQWLEKWLPLFIIAVALYTLLKPN 124

Query: 125 HQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLASGLA 184
                +  P        KQ  QGI LGFYDG AGP TGAFWT+SS++ Y+  +L + GLA
Sbjct: 125 AMGCPTYEPPVKAPSKFKQWRQGIPLGFYDGFAGPATGAFWTISSVSQYKLPVLNSCGLA 184

Query: 185 KAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRPLFILVV 244
           +AM L SN TSL  F  LG ++ ++GL+MG+C+M G+++GA +AI+FG PFIRPLFI +V
Sbjct: 185 RAMTLISNLTSLSVFLALGQVNLMVGLSMGLCMMLGSFIGARTAIKFGVPFIRPLFISIV 244

Query: 245 TILAGKLAYDAW 256
            ++A  LA+ AW
Sbjct: 245 ILIAINLAWGAW 256