Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  162 bits (410), Expect = 6e-45
 Identities = 99/249 (39%), Positives = 138/249 (55%), Gaps = 12/249 (4%)

Query: 9   TIMVLAL---VAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAAW 65
           T+ V AL   VA +AGFID++AGGGG+LT+PAL+  GLPP +ALGTNKL A   S  A+ 
Sbjct: 6   TLQVAALLFGVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFFASL 65

Query: 66  TYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTVLHRPH 125
            + R+ L D    K A     IGA LGT+ V  + T  L  VLP +ILA   Y +  +  
Sbjct: 66  YFVRKGLVDLKTVKLALFCAFIGAALGTVLVQLVDTKILELVLPFLILAIGCYFLFSKKV 125

Query: 126 QTE---QSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLASG 182
             E   Q +TP              +G+G YDG  GPGTG+F+ ++ + L  F +  A+ 
Sbjct: 126 SEEDRHQVLTPTVF------AFTAALGVGLYDGFFGPGTGSFFALAFVTLAGFGLAKATA 179

Query: 183 LAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRPLFIL 242
            AK +N ++N  SL+ FAL G + WLLGL M      GA +G+   +  G   I+PL + 
Sbjct: 180 HAKVLNFSTNIASLIFFALGGKVIWLLGLVMLAGQAIGATLGSRLVVTKGTKIIKPLVVT 239

Query: 243 VVTILAGKL 251
           +   ++ KL
Sbjct: 240 MSLAMSLKL 248