Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 65.1 bits (157), Expect = 1e-15
 Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 14/248 (5%)

Query: 2   MEWIEPTTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASS 61
           M+W+      ++AL   + G ++AVAGGG  +T+ AL+ +G+PP +A  T   A      
Sbjct: 1   MDWL------LIALAGLLGGMLNAVAGGGSFITLFALVFVGVPPLMANATGTAALLPGYL 54

Query: 62  TAAWTYYRQKLFDPA--CWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYT 119
            +AW  +R+++  PA    K   +  + G  LG   + + S      ++P +IL A L  
Sbjct: 55  ASAWR-FRKEIEYPANLSLKTLCLIAIAGGFLGAAILLSTSEQVFAYLVPWLILLATLAF 113

Query: 120 V----LHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRF 175
           +    L +      +VT     K     ++  I +  Y G    G G     +   L + 
Sbjct: 114 IAGPWLLKKRLAHANVTCVNTVKPLTAMMILFI-VCIYGGYFNGGLGIILLATFGLLGQT 172

Query: 176 NILLASGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPF 235
            +   +GL   ++      ++V +AL   ID    L + +  + G Y+GA  A R     
Sbjct: 173 QLQGMNGLKNLLSALLTSIAVVIYALGDLIDGQYLLLLAIMAIVGGYLGAALAYRIPQSL 232

Query: 236 IRPLFILV 243
           +R   +LV
Sbjct: 233 LRGFIVLV 240