Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., putative membrane spanning protein from Caulobacter crescentus NA1000

 Score =  156 bits (395), Expect = 4e-43
 Identities = 98/245 (40%), Positives = 137/245 (55%), Gaps = 9/245 (3%)

Query: 13  LALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAAWTYYRQKL 72
           L +VA +AG +DA+AGGGG++T+PALL  GL P  ALGTNKL    ++ ++   + R+ L
Sbjct: 10  LFVVAALAGALDAIAGGGGLITLPALLLAGLSPVQALGTNKLQGAISALSSTSAFARRGL 69

Query: 73  FDPACWKRAFI---ATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTVLHRPHQTEQ 129
            D   WK A     A+ +  + G L    +S ++LR V+PL+++A ALY  L R  + E 
Sbjct: 70  ID---WKTALPVAGASALAGLGGALCASLLSPEFLRAVVPLMLIAIALYFGLSRAIKAED 126

Query: 130 SVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLASGLAKAMNL 189
            VTP     L          +GFYDG+ GPG GAF+ V+ + L  +  L A+   K  N 
Sbjct: 127 -VTPRMA--LIPFACFVAPLIGFYDGIFGPGAGAFYMVAIVTLLGYGALKATAHTKLANA 183

Query: 190 TSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRPLFILVVTILAG 249
            SN  SLV F L G + W +GL M      GA VG+  A+RFG   IRPL +++   +A 
Sbjct: 184 ASNLGSLVLFTLKGAVVWPVGLVMAAGAFIGAQVGSRLAMRFGPKLIRPLLVVISCAMAV 243

Query: 250 KLAYD 254
           KL  D
Sbjct: 244 KLLAD 248