Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  156 bits (394), Expect = 5e-43
 Identities = 93/249 (37%), Positives = 135/249 (54%), Gaps = 12/249 (4%)

Query: 9   TIMVLAL---VAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAAW 65
           T+ + AL   VA +AGFID++AGGGG+LT+PAL+  GLPP +ALGTNKL A   S  A+ 
Sbjct: 19  TLQIAALLFGVAMVAGFIDSIAGGGGLLTIPALMWAGLPPAVALGTNKLQACGGSFFASL 78

Query: 66  TYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTVLHR-- 123
            + R+ L D    K + I    GA LGT+ V  +    L  VLP +ILA   Y +  +  
Sbjct: 79  YFVRKGLVDLKAVKLSLICAFAGAALGTILVQLVDAKVLELVLPFLILAIGCYFLFSKKI 138

Query: 124 -PHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLASG 182
                 Q +TP              +G+G YDG  GPGTG+F+ ++ + L  F +  A+ 
Sbjct: 139 SEDDRHQVLTPTAF------AFTAALGVGLYDGFFGPGTGSFFALAFVTLAGFGLAKATA 192

Query: 183 LAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRPLFIL 242
            AK +N ++N  SL+ F L G + W+LGL M      GA +G+   +  G   I+PL + 
Sbjct: 193 HAKVLNFSTNIASLIFFTLGGKVIWVLGLVMLAGQAIGATLGSRLVVTKGTKIIKPLVVT 252

Query: 243 VVTILAGKL 251
           +   ++ KL
Sbjct: 253 MSLAMSVKL 261