Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 714 a.a., ATP-dependent helicase DinG/Rad3 from Pseudomonas fluorescens FW300-N2E2

 Score =  434 bits (1115), Expect = e-126
 Identities = 271/728 (37%), Positives = 404/728 (55%), Gaps = 54/728 (7%)

Query: 1   MLTKNIQDSIRNSYQNLQNQLENFIPRRAQNFLVAEMAKTLC-------GAYHKSTQMLV 53
           M++  ++ +I+ +Y     + ++  PR  Q  ++AE+AK L        G       ++ 
Sbjct: 1   MISTELKTTIQGAYSRFL-EAKSLKPRYGQRLMIAEVAKVLGDIDTDDEGRRSGEPAVVA 59

Query: 54  AEAGTGIGKSLSYLMAVIPVAVVNKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFI 113
            EAGTG GK+++Y +A IP A    +++VI+TATVALQEQ++ KDLP   R S  NF+F 
Sbjct: 60  VEAGTGTGKTVAYSLAAIPTAKAAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFTFA 119

Query: 114 LAKGRQRYCCSERLAAACGIDDGQIA---LFESKPKPHETE-----LLAELHTALSQGKW 165
           LAKGR RY C  +L         Q A   LFE +    E +     L   +   L+  KW
Sbjct: 120 LAKGRGRYMCLSKLDMLLQEGHAQTATAQLFEEEGFKIEVDEASQKLFTSMIEKLAGNKW 179

Query: 166 DGDRDGWPSPISDELWSVIVSDKHSCNGSFSVHRHCP------FQKARSELDKADVIIAN 219
           DGDRD W + + D  WS + +D   C      +RHCP      F KAR  + K DVI+ N
Sbjct: 180 DGDRDSWSTALEDADWSRLTTDHSQCT-----NRHCPNFGQCAFYKAREGMGKVDVIVTN 234

Query: 220 HSLVMADADLGGGVILPAPEETIYVFDEAHHLPTVAREHASAAATLKGAASWLEKLNQSL 279
           H +V+AD  LGGG +LP P +TIYVFDE HHLP  A  H +    L+  A WLE   ++L
Sbjct: 235 HDMVLADLALGGGAVLPDPRDTIYVFDEGHHLPDKAIGHFAHYTRLRSTADWLETTAKNL 294

Query: 280 SKFTAL----GDE----KRAERFAEEARTAIQYLIPTLNQLPKQFMAEQFVEGI----YR 327
           +K  A     GD     ++    A E +T  Q++     Q+   F   + VEG     +R
Sbjct: 295 TKLLAQHPLPGDLGKFIEQVPELAREIKTNQQFMFTACEQVA-DFKPGEDVEGRERPRHR 353

Query: 328 FEHGELPQWLADESQALSKSSQKAMQSVSKVADLIAEKVKEGELATRIAEPALGE----L 383
           F  G +P+ + +    L K   +     +++ DL+ E + +GE+   IA     E     
Sbjct: 354 FVGGVIPEHMREMGIELKKGFARLTDLFTRLTDLLKEGM-DGEVNIGIASNQAEEWYPLF 412

Query: 384 GFYVQRLENLTQVWQLMAKPNKDKGAPLARWLEVSPERE-GDYLVSVSPLEIGWQLDQQL 442
           G  + R +   ++W      + +   P+ARWL ++      D  V+ SP+     L + L
Sbjct: 413 GSLLSRSQGNWELWTAFTAEDPEDNPPMARWLTLAESGSLFDIEVNASPILAAEMLRRNL 472

Query: 443 WSRCVGAILVSATLRALNSFGFFCRQAGISDKAEDGVQFLALASPFDYPTQGELLIPKME 502
           W+   GA++ SATL AL +F  F  +AG+  KA   V    + SPF +   G L +P ++
Sbjct: 473 WNVAYGALVTSATLTALGTFDRFRMRAGLPKKAVTAV----VPSPFHHADAGVLRVPDLK 528

Query: 503 MEPQ-AEGYTAYLAKKVLCYLQADKANLVLFASYWQMREVAESLKVEFTKRGWALQVQGE 561
            +P+ A  +TA + + +   ++  +  LVLF+S  QM++V + L  ++ K+ +   +QG 
Sbjct: 529 ADPRDAAAHTAAIIRDLPELVEGSRGTLVLFSSRKQMQDVFDGLDRDWRKQVF---IQGN 585

Query: 562 KSRSEILNKHKKLIEKQKTSVLFGTGSFSEGLDLPGELLENLIITKIPFAVPTSPVEQAH 621
            S+ E LNKHK  ++   +SVLFG  SF+EG+DLPG   E+++I KIPF+VP  PVE A 
Sbjct: 586 LSKQETLNKHKARVDGGDSSVLFGLASFAEGVDLPGAYCEHVVIAKIPFSVPDDPVEAAL 645

Query: 622 AEYIQELGGNPFMQITVPEASKKLIQSVGRLLRKERDSGRVVILDRRVVSKRYGKALLDA 681
           AE+I+  GGNPFM+I+VP+AS KL+Q+ GRLLR E D G + +LDRR+V++RYGKA+L+A
Sbjct: 646 AEWIEARGGNPFMEISVPDASLKLVQACGRLLRTEEDRGTITLLDRRLVTQRYGKAILNA 705

Query: 682 LPPFKRTI 689
           LPPF+R I
Sbjct: 706 LPPFRREI 713