Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 714 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

 Score =  447 bits (1149), Expect = e-129
 Identities = 280/731 (38%), Positives = 407/731 (55%), Gaps = 60/731 (8%)

Query: 1   MLTKNIQDSIRNSYQNLQNQLENFIPRRAQNFLVAEMAKTLC-------GAYHKSTQMLV 53
           ML+  ++  I+ +Y     + +    R  Q  ++AE+AK L        G       ++ 
Sbjct: 1   MLSTELKSQIQGAYTRFL-EAKGLKARYGQRLMIAEVAKVLGTIKTDAEGRRESEPAVVA 59

Query: 54  AEAGTGIGKSLSYLMAVIPVAVVNKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFI 113
            EAGTG GK+++Y +A IP A    +++VI+TATVALQEQ+++KDLP   R S  NFSF 
Sbjct: 60  VEAGTGTGKTVAYSLAAIPTAKAAGKRLVIATATVALQEQIVHKDLPDLMRNSGLNFSFA 119

Query: 114 LAKGRQRYCCSERLAAACGIDDGQIA---LFESKPKPHETE-----LLAELHTALSQGKW 165
           LAKGR RY C  +L         Q A   LFE +    E +     L   +   L+  +W
Sbjct: 120 LAKGRGRYLCLSKLDLLLQEGQAQSATAQLFEEEGFRIEVDERSQKLFTSMIEKLAGNRW 179

Query: 166 DGDRDGWPSPISDELWSVIVSDKHSCNGSFSVHRHCP------FQKARSELDKADVIIAN 219
           DGDRD WP  + D  WS + +D   C G     RHCP      F KAR  + K DVI+ N
Sbjct: 180 DGDRDSWPEELGDSDWSQLTTDHSQCTG-----RHCPNFQQCAFYKAREGMTKVDVIVTN 234

Query: 220 HSLVMADADLGGGVILPAPEETIYVFDEAHHLPTVAREHASAAATLKGAASWLEKLNQSL 279
           H +V+AD  LGGG +LP P ETIYVFDE HHLP  A  H +    L+  A WL ++ ++L
Sbjct: 235 HDMVLADLALGGGAVLPDPRETIYVFDEGHHLPDKAIGHFAHFTRLRSTADWLGQVEKNL 294

Query: 280 SKFTAL----GDEKRA----ERFAEEARTAIQYLIPTLNQLPKQFMAEQFVEGI----YR 327
           +K  A     G+  R        A E RT  Q++     QL   F A + +EG     +R
Sbjct: 295 TKLLAQHPLPGELGRLVEGIPELARELRTQQQFMFSACEQLA-DFKAGEDMEGRERPRHR 353

Query: 328 FEHGELPQWLADESQALSKSSQKAMQSVSKVADLIAEKVKEGELATRIAEPALGE----L 383
           F  G +P+ L +    L K   K     +++A+L+ E + +GE  + IA     E     
Sbjct: 354 FVGGVVPEHLVELGTELKKGFAKLTDLFTRIAELLKEDM-DGETGSGIASHQAEEWYPLF 412

Query: 384 GFYVQRLENLTQVWQLMAKPNKDKGAPLARWLEVSPEREG----DYLVSVSPLEIGWQLD 439
           G  + R +   ++W      + +   P+ARWL ++   EG    D  V+ SP+     L 
Sbjct: 413 GSLLTRSQGNWELWTAFTVEDPEDSPPMARWLTLA---EGGALFDIEVNASPILAAETLR 469

Query: 440 QQLWSRCVGAILVSATLRALNSFGFFCRQAGISDKAEDGVQFLALASPFDYPTQGELLIP 499
           + LW+   GA++ SATL ALNSF  +  +AG+   A   V    + SPF +   G L +P
Sbjct: 470 RNLWNVAFGALVTSATLTALNSFDRYRMRAGLPKGAVTAV----VPSPFHHADAGVLRVP 525

Query: 500 KMEMEPQ-AEGYTAYLAKKVLCYLQADKANLVLFASYWQMREVAESLKVEFTKRGWALQV 558
            ++ +P+ A  +TA + +++   ++  +  LVLF+S  QM++V + L+ ++ +R   + +
Sbjct: 526 DLKADPRDAAAHTAAIVRELPALVEGARGTLVLFSSRKQMQDVFDGLERDWRRR---VLI 582

Query: 559 QGEKSRSEILNKHKKLIEKQKTSVLFGTGSFSEGLDLPGELLENLIITKIPFAVPTSPVE 618
           QG  S+ E LNKHK  ++  ++SVLFG  SF+EG+DLPG   E+++I KIPFAVP  PVE
Sbjct: 583 QGNLSKQETLNKHKARVDDGESSVLFGLASFAEGVDLPGAYCEHVVIAKIPFAVPDDPVE 642

Query: 619 QAHAEYIQELGGNPFMQITVPEASKKLIQSVGRLLRKERDSGRVVILDRRVVSKRYGKAL 678
            A AE+I   GGNPFM+I VP+AS +L+Q+ GRLLR E D G + +LDRRVV++RYGKA+
Sbjct: 643 AALAEWIGARGGNPFMEIAVPDASLRLVQACGRLLRTETDRGTITLLDRRVVTQRYGKAI 702

Query: 679 LDALPPFKRTI 689
           L+ALPPF+R I
Sbjct: 703 LNALPPFRREI 713