Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 711 a.a., ATP-dependent helicase DinG/Rad3 from Xanthomonas campestris pv. campestris strain 8004

 Score =  366 bits (939), Expect = e-105
 Identities = 244/721 (33%), Positives = 373/721 (51%), Gaps = 64/721 (8%)

Query: 2   LTKNIQDSIRNSYQNLQNQLENFIPRRAQNFLVAEMAKTLCGAYHKSTQMLVAEAGTGIG 61
           LT+ ++  IR +Y  LQ     F  RRAQ+ ++  +++ L      S  + VAEA TG+G
Sbjct: 20  LTEPVKAGIREAYAKLQANTPGFATRRAQSQMIGLVSRALA----TSGGIGVAEAPTGVG 75

Query: 62  KSLSYLMAVIPVAVVNKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFILAKGRQRY 121
           KSL YL A +P+A+  K+K+VIST TVALQ QL+ +D+P + + +    +  LAKGR RY
Sbjct: 76  KSLGYLTAGVPIALATKKKLVISTGTVALQSQLVERDIPAFLKATGLEATVALAKGRTRY 135

Query: 122 CCSERLAAACG-------IDDGQIALFESKPKPHETELLAELHTALSQGKWDGDRDGWPS 174
            C+   A   G        +D Q+ L++    P + +L   L  A +   W+GD D  P 
Sbjct: 136 LCTRNAAELEGETSQNGMFEDEQV-LYDRPLSPADVDLAKRLAKAYAARTWNGDLDDAPE 194

Query: 175 PISDELWSVIVSDKHSCNGS-FSVHRHCPFQKARSELDKADVIIANHSLVMADADLG--- 230
           P+S  L   + +    C G   S    CP  KAR+++ +A +++ NH+L+++   LG   
Sbjct: 195 PVSVPLRMRVTTPASGCAGRRCSYAAQCPVLKARTDVREAQIVVTNHALLLSSLSLGDAE 254

Query: 231 -GGVILPAPEETIYVFDEAHHLPTVAREHASAAATLKGAASWLEKLNQSLSK-FTALGDE 288
            G  ++  P + + V DE HH+  VA +  +A   L   A    ++   ++  + A+  +
Sbjct: 255 NGQPLIAPPSDMLLVLDEGHHIAGVAIDQGAANLPLDDMAKRTGRMQILIAAAYRAVDKD 314

Query: 289 KRAERFAEEARTAIQYLIPTLNQLPKQFMAEQFVEGIYRFEHGEL------------PQW 336
           K       EA      +   +++L K F  E  VE +++ E GE             PQW
Sbjct: 315 KIGNLLPSEAIE----VAARVSKLLKAFHTE--VERVWKPEPGERDPLWRAPNGKLPPQW 368

Query: 337 ------LADESQALSKSSQKAMQSVSKVADLIAEKVKEGELATRIAEPALGELGFYVQRL 390
                 L +E++AL      A  +V+K           G+      E     LG  ++  
Sbjct: 369 GPAIEELGEETRALFNWVHAAHGTVAK-----------GKQDDAARERLQRSLGMALEMA 417

Query: 391 ENLTQVWQLMAKPNKDKGAPLARWLEVSPEREGDYLVSVSPLEIGWQLDQQLWSRCVGAI 450
           E    +W    + +KD   P+ARW+ +S  R+GD +   SP+     L   LW+     +
Sbjct: 418 EQQHNLWSGWRREDKDGQPPMARWITLS--RDGDLICHCSPVSAAQVLRTLLWNEVDSVV 475

Query: 451 LVSATLRALNSFGFFCRQAGISDKAEDGVQFLALASPFDYPTQGELLIPKMEMEPQ-AEG 509
           + SATL     F  F    G+ D AE      +LASPFD P Q EL++P   + P   EG
Sbjct: 476 MTSATLTGGGDFQSFAIDNGLPDHAE----MASLASPFDLPNQAELIVPNFPVTPDDREG 531

Query: 510 YTAYLAKKVLCYLQ-ADKANLVLFASYWQMREVAESLKVEFTKRGWALQVQGEKSRSEIL 568
           +   +AK ++  L  A K ++VLF S W+M +VA+ L +    R   + VQGE ++S+++
Sbjct: 532 HPKEVAKYLVRELDWAAKGSIVLFTSRWKMEKVADLLPLAQRNR---VLVQGEGNKSQLI 588

Query: 569 NKHKKLIEKQKTSVLFGTGSFSEGLDLPGELLENLIITKIPFAVPTSPVEQAHAEYIQEL 628
            +H + I   + SVLFG  SF EGLDLPGE    ++IT++PFAVPT P     +E+++  
Sbjct: 589 TEHLRRIAAGEGSVLFGLNSFGEGLDLPGEACTTVVITQVPFAVPTDPQTSTLSEWLESR 648

Query: 629 GGNPFMQITVPEASKKLIQSVGRLLRKERDSGRVVILDRRVVSKRYGKALLDALPPFKRT 688
           G N F  I +P A + L Q  GRL+R   D GRV+ILD R++++RYGK +LDALPPFKR 
Sbjct: 649 GHNAFNLIAIPHALRTLTQFAGRLIRSSNDHGRVIILDSRLLTRRYGKRILDALPPFKRV 708

Query: 689 I 689
           I
Sbjct: 709 I 709