Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 668 a.a., DinG family ATP-dependent helicase YoaA from Xanthomonas campestris pv. campestris strain 8004

 Score =  221 bits (563), Expect = 9e-62
 Identities = 200/699 (28%), Positives = 304/699 (43%), Gaps = 100/699 (14%)

Query: 17  LQNQLENFIPRRAQNFLVAEMAKTLCGAYHKSTQMLVAEAGTGIGKSLSYLMAVIPVAVV 76
           L  QL+ F PR AQ  L   +A+       +   +L+AEAGTG GK+ +YL+     A++
Sbjct: 18  LARQLDAFAPRAAQLRLTGAIAEAF-----EQRDVLLAEAGTGTGKTYAYLVP----ALL 68

Query: 77  NKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFILAKGRQRYCCSERLAAACGIDDG 136
           +  K ++ST T ALQ+QL ++DLP  R          L KGR  Y C  R   A G    
Sbjct: 69  SGLKTIVSTGTRALQDQLFHRDLPRVRAALGIGLRSALLKGRANYLCKYRTQQARG---- 124

Query: 137 QIALFESKPKPHETELLAELHTALSQGKWDG--------DRDGWPSPISDELWSVIVSDK 188
                  +P+    E + +    ++   W G        + D  P      L  ++ S  
Sbjct: 125 -------EPRFASPEQVTQFQRIVA---WSGRTQFGDMAELDALPD--DSPLLPMVTSTV 172

Query: 189 HSCNGSFSVHRHCPFQ------KARSELDKADVIIANHSLVMADADL---GGGVILPAPE 239
            +C G+      CPF       +AR     AD+++ NH L++AD  L   G G ILP  +
Sbjct: 173 DNCLGT-----ECPFYSECFVVQARQRAQAADLVVVNHHLLLADLALKQEGFGEILPGAQ 227

Query: 240 ETIYVFDEAHHLPTVAREHASAAATLKGAASWLEKLNQSLSKFTALGDEKRAERFAEEAR 299
              +V DEAH LP +A   A+      G   W E     + +           R    A+
Sbjct: 228 A--FVIDEAHQLPELA---ANFFGESFGMRPWQELARDCMVE----------ARLVAGAQ 272

Query: 300 TAIQYLIPTLNQLPKQFMAEQFVEGIYRFEHGELPQWLADESQALSKSSQKAMQSVSKVA 359
            ++Q  I  L+   +   A   +EG+         QW A     + +     + +++++ 
Sbjct: 273 ASLQAPILALDDALRGLRAG--MEGL----PPRGTQWRALAKPQVREGFDAVLSALARLG 326

Query: 360 DLIAEKVKEGELATRIAEPALGELGFYVQRLENLTQVWQLMAKPNKDKGAPLAR------ 413
           + +        L  R A P         Q   N    W     P  D    L        
Sbjct: 327 EAL--------LPLREASPGFDGCTARAQEALNRLSRWLGEDVPVPDFEQDLPETVDNDV 378

Query: 414 -WLEVSPEREGDYLVSVSPLEIGWQLDQQLWSRCVGAILVSATLRALNSFGFFCRQAGIS 472
            W E+SP     +    +PL++   L +         +  SATL     F     + G++
Sbjct: 379 LWYELSPR---GFRCQRTPLDVSGPLREHREKSQAAWVFTSATLAVGGEFDHIALRLGLN 435

Query: 473 DKAEDGVQFLALASPFDYPTQGELLIPKMEMEPQAEGYTAYLAKKVLCYLQADKAN-LVL 531
           D        L   SPFD+ +Q    +P    +P A G+   L   +   L+A      +L
Sbjct: 436 DPIT-----LLQPSPFDWASQALCYLPPNLPDPAARGFGTALIAALHPVLEASNGRAFLL 490

Query: 532 FASYWQMREVAESLKVEFTKRGWALQVQGEKSRSEILNKHKKLIEKQKTSVLFGTGSFSE 591
           FAS+  +RE AE+L+       W L VQGE  R+ +L + +         VL G+ SF E
Sbjct: 491 FASHRALREAAEALR----DGPWPLFVQGEAPRATLLQRFRT----SGNGVLLGSASFRE 542

Query: 592 GLDLPGELLENLIITKIPFAVPTSPVEQAHAEYIQELGGNPFMQITVPEASKKLIQSVGR 651
           G+D+ G+ L  ++I K+PFA P  PV +A  + I+  GGNPF    +P+A   L Q VGR
Sbjct: 543 GVDVVGDALSVVVIDKLPFAAPDDPVFEARLDAIRRDGGNPFRDEQLPQAVIALKQGVGR 602

Query: 652 LLRKERDSGRVVILDRRVVSKRYGKALLDALPPFKRTIE 690
           L+R E D G +V+ D R+++K YG+  L++LPPF RT E
Sbjct: 603 LIRSETDRGVLVLCDPRLLNKGYGRTFLNSLPPFSRTRE 641