Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 714 a.a., Helicase c2 from Pseudomonas syringae pv. syringae B728a

 Score =  429 bits (1102), Expect = e-124
 Identities = 267/728 (36%), Positives = 404/728 (55%), Gaps = 54/728 (7%)

Query: 1   MLTKNIQDSIRNSYQNLQNQLENFIPRRAQNFLVAEMAKTLC-------GAYHKSTQMLV 53
           M++  ++  I+ +Y     + ++  PR  Q  ++AE+AK L        G       ++ 
Sbjct: 1   MISTELKTQIQGAYSRFL-EAKSLKPRYGQRLMIAEVAKVLGDIDTDEEGRRSGDPAVVA 59

Query: 54  AEAGTGIGKSLSYLMAVIPVAVVNKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFI 113
            EAGTG GK+++Y +A IP A    +++VI+TATVALQEQ++ KDLP   R S  NF+F 
Sbjct: 60  VEAGTGTGKTVAYAIASIPTAKAAGKRLVIATATVALQEQIVYKDLPDLMRNSGLNFTFA 119

Query: 114 LAKGRQRYCCSERLAAACGIDDGQIA---LFESKPKPHETE-----LLAELHTALSQGKW 165
           LAKGR RY C  +L A     D   A   LFE +    E +     L   +   L+  KW
Sbjct: 120 LAKGRGRYMCLSKLDALLQESDATNATAQLFEEEGFKIEVDEASQKLFTSMLQKLAGNKW 179

Query: 166 DGDRDGWPSPISDELWSVIVSDKHSCNGSFSVHRHCP------FQKARSELDKADVIIAN 219
           DGDRD WP  ++D+ W+ + +D   C      +RHCP      F KAR  + K DVI+ N
Sbjct: 180 DGDRDSWPQELADQDWARLTTDHSQCT-----NRHCPNFQQCAFYKAREGMGKVDVIVTN 234

Query: 220 HSLVMADADLGGGVILPAPEETIYVFDEAHHLPTVAREHASAAATLKGAASWLEKLNQSL 279
           H +V+AD  LGGG +LP P +T+YVFDE HHLP  A  H +    LK  A WLE+  ++L
Sbjct: 235 HDMVLADLALGGGAVLPDPRDTLYVFDEGHHLPDKAIGHFAHYTRLKSTADWLEQTAKNL 294

Query: 280 SKFTAL----GDE----KRAERFAEEARTAIQYLIPTLNQLPKQFMAEQFVEGI----YR 327
           +K  A     GD     ++    A E +   Q++     QL   F A + ++G     +R
Sbjct: 295 AKLLAQHPLPGDLGKLIEQVPELAREIKGHQQFMFGACEQLA-DFRAGEDMQGRERPRHR 353

Query: 328 FEHGELPQWLADESQALSKSSQKAMQSVSKVADLIAEKVKEGELATRIAEPALGE----L 383
           F  G +P+ + +    L K   +     +++ +L+ E + +GE+   IA     E     
Sbjct: 354 FVGGVIPEHIREMGIELKKGFARLDDLFTRLTELLKEGM-DGEVNIGIASHQAEEWYPLF 412

Query: 384 GFYVQRLENLTQVWQLMAKPNKDKGAPLARWLEVSPEREG-DYLVSVSPLEIGWQLDQQL 442
           G  + R     ++W      + +   P+ARWL ++      D  V+ SP+     L + L
Sbjct: 413 GSLLARAHGNWELWTAFTAEDPEDSPPMARWLTLADSGAMFDIEVNASPILAAEMLRRNL 472

Query: 443 WSRCVGAILVSATLRALNSFGFFCRQAGISDKAEDGVQFLALASPFDYPTQGELLIPKME 502
           W+   GA++ SATL AL  F  +  +AG+   A   V    + SPF +   G L +P ++
Sbjct: 473 WNIAYGALVTSATLTALGKFDRYRMRAGLPKGAVTAV----VPSPFHHADAGVLRVPDLK 528

Query: 503 MEPQ-AEGYTAYLAKKVLCYLQADKANLVLFASYWQMREVAESLKVEFTKRGWALQVQGE 561
            +P+ +  +TA + + +   ++  +  LVL++S  QM++V + L  ++ K+ +   +QG 
Sbjct: 529 ADPRDSVAHTAAIIRDLPGLVEGSRGTLVLYSSRKQMQDVFDGLDRDWRKQVF---IQGN 585

Query: 562 KSRSEILNKHKKLIEKQKTSVLFGTGSFSEGLDLPGELLENLIITKIPFAVPTSPVEQAH 621
            S+ E LNKHK  ++  ++SVLFG  SF+EG+DLPG   E+++I KIPFAVP  PVE A 
Sbjct: 586 LSKQETLNKHKARVDSGESSVLFGLASFAEGVDLPGAYCEHVVIAKIPFAVPDDPVEAAL 645

Query: 622 AEYIQELGGNPFMQITVPEASKKLIQSVGRLLRKERDSGRVVILDRRVVSKRYGKALLDA 681
           AE+I+  GGNPFM+I VP+AS +L+Q+ GRLLR E D G + +LDRRVV++RYGKA+L+A
Sbjct: 646 AEWIEARGGNPFMEIAVPDASLRLVQACGRLLRTEEDRGTITLLDRRVVTQRYGKAILNA 705

Query: 682 LPPFKRTI 689
           LPPF+R I
Sbjct: 706 LPPFRREI 713