Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 665 a.a., ATP-dependent helicase DinG (RefSeq) from Shewanella amazonensis SB2B

 Score =  221 bits (564), Expect = 7e-62
 Identities = 200/698 (28%), Positives = 327/698 (46%), Gaps = 96/698 (13%)

Query: 17  LQNQLENFIPRRAQNFLVAEMAKTLCGAYHKSTQMLVAEAGTGIGKSLSYLMAVIPVAVV 76
           L   +  +  R  Q  +  E+A  L       T  LV EAGTG+GK+ +YL+     A++
Sbjct: 24  LSRFIRGYRRREVQQQMAEEVASCL-----SHTHKLVLEAGTGVGKTFAYLVP----ALL 74

Query: 77  NKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFILAKGRQRYCCSERLAAACGIDDG 136
           + ++V++ST +  LQEQL  KDLP    +   +    + KGR  Y C   +AA       
Sbjct: 75  SGKQVIVSTGSKNLQEQLFYKDLPALLEMLKLHLPVSILKGRSNYLCQRLMAAQME---- 130

Query: 137 QIALFESKPKPHETELLAELH--TALSQGKWDGDRDGWPSPISD-ELWSVIVSDKHSCNG 193
             A F      H+ +LL +L      +Q   DGD         D    S++ S + SC G
Sbjct: 131 --AAFS-----HDEKLLDDLLKLNQFAQTTEDGDLGNLTGVAEDARAISLVASTQDSCTG 183

Query: 194 S-FSVHRHCPFQKARSELDKADVIIANHSLVMADA---DLGGGVILPAPEETIYVFDEAH 249
              + +  C  +KAR+    A +I+ NH L  AD    D G   +LP  +  I  FDEAH
Sbjct: 184 QRCAFYEDCFTRKARARAMNARLIVVNHHLFFADRVLKDTGFAELLPDVDAVI--FDEAH 241

Query: 250 HLPTVAREHASA---AATLKGAASWLEKLNQSLSKFTALGDEKRAERFAEEARTAIQYLI 306
            LP +A ++  A     +L+     +E+L +       LGD +  +   + AR  +    
Sbjct: 242 LLPDIAMQYFGAQLSTGSLRRLLDGIERLTEG-----ELGDTQGLKLLPQRARIKL---- 292

Query: 307 PTLNQLPKQFMAEQFVEGIYRFEHGELPQWLADESQALSKSSQKAMQSVSKVADLIAEKV 366
                       + +   +      +  Q L D++ AL+    + +  +S +  L+   V
Sbjct: 293 ------------DAWQNCLLDAGSSDFRQLLKDKTAALAAG--ELIAELSALEALLLANV 338

Query: 367 KEGELATRIAEPALGELGFYVQRLENLTQVWQLMAKPNKDKGAPLARWLEVSPEREGDYL 426
              E            L  +  +L  L Q  +     + D G+  +  +++    E   +
Sbjct: 339 GRSE-----------PLDDFAVKLPELKQKLERFIACD-DPGSAYS--IDIG---ERHLM 381

Query: 427 VSVSPLEIGWQLDQQLWSRCVGAILVSATLRALNSFGFFCRQAGISD-------KAEDGV 479
           + +SP++I  +   +L+S     +  SATL+   S  FF R+ G++        +++ G 
Sbjct: 382 LRISPIDIA-KACSELFSEDTAWVFTSATLQVERSLQFFTRELGLTSAKPVSAKRSQSGA 440

Query: 480 -------QFLALASPFDYPTQGELLIPK-MEMEPQAEGYTAYLAKKVLCYLQADKAN-LV 530
                  + + L SPFDYP Q  L +P+ +      +     L +  L  ++A K    +
Sbjct: 441 GAKSAVCKEVLLDSPFDYPRQSLLCVPRRLGSVANQDAMVCQLTEVCLKLIRAAKGRTFI 500

Query: 531 LFASYWQMREVAESLKVEFTKRGWALQVQGEKSRSEILNKHKKLIEKQKTSVLFGTGSFS 590
           LF S+  M  VA SL     +  + L VQG+  + ++L+K ++L E    +VL GTGSF 
Sbjct: 501 LFTSHRMMEAVARSL---VGRCHYPLLVQGQGGKQQLLSKFRQLGE----AVLLGTGSFW 553

Query: 591 EGLDLPGELLENLIITKIPFAVPTSPVEQAHAEYIQELGGNPFMQITVPEASKKLIQSVG 650
           EG+D+ G+LL  +II K+PFA P   + +A A  ++  GG+PF++I++P+A   L Q  G
Sbjct: 554 EGVDVRGKLLSCVIIDKLPFASPDDSLYKARASRVEARGGDPFLEISLPQAVIALKQGAG 613

Query: 651 RLLRKERDSGRVVILDRRVVSKRYGKALLDALPPFKRT 688
           RL+R E D G +VI D R+V++ YG+A L +LPP  RT
Sbjct: 614 RLIRDETDRGVLVICDNRLVNRPYGQAFLQSLPPMART 651