Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 927 a.a., Helicase c2 (NCBI) from Rhodospirillum rubrum S1H

 Score =  119 bits (297), Expect = 9e-31
 Identities = 174/698 (24%), Positives = 282/698 (40%), Gaps = 84/698 (12%)

Query: 35  AEMAKTLCGAYHKSTQ-----MLVAEAGTGIGKSLSYLMAVIPVAVVNKRKVVISTATVA 89
           A+ A  LC A+          +++AEAGTG+GK+L Y+      A  N+  V IST T  
Sbjct: 227 ADYASALCVAFQPRATPDWPTLVLAEAGTGVGKTLGYIAPASLWAERNEGTVWISTYTRN 286

Query: 90  LQEQLLNKDLPLYRRISDQNFSFILAKGRQRYCCSERLAAACGIDDGQIALFESKPKPHE 149
           LQ QL  +   LY   +++    ++ KGR+ Y C      A G       L  +  +   
Sbjct: 287 LQRQLDGELDRLYPDPAEKMRKVVIRKGRENYLCLLNYEEAVG------RLGATPQEAVA 340

Query: 150 TELLAELHTALSQGKW-DGDRDGWPSPISDELWSVIVSDKH-SCNGSFSVH-RHCPFQKA 206
             L+A    A   G    GD  GW   I     S+ ++D+   C  S   H   C  ++A
Sbjct: 341 LGLMARWIKATRDGDMVGGDFPGWMVDILGRERSLALADRRGECVFSSCDHYDRCFIERA 400

Query: 207 RSELDKADVIIANHSLVMADADLGGGVILPAPEETIYVFDEAHHLPTVA----------- 255
                +A +++ANH+LV+  A LGG  I      T Y+ DE HH+   A           
Sbjct: 401 VRRARRARLVVANHALVLIQAALGG--IDDDSRPTRYILDEGHHVFDAADSAFSAHLSGF 458

Query: 256 -------------REHASAAATLKGAASWL--------EKLNQSLSKFTALGDEKRAERF 294
                          H S A  L+     L          L ++L    AL     A+R 
Sbjct: 459 EGAELRRWLLGAEEGHRSRARGLRRRVDGLYDQAGPLAADLEEALDGARALPGPGWAQRL 518

Query: 295 A-EEARTAIQ-YLIPTLNQLPKQFMAEQFVEGIYRFEHGELPQWLADESQALSKSSQKAM 352
           A    R AI+ +L     Q+  +  A +   G+       LP+ L D    ++  +   +
Sbjct: 519 AGGTGRGAIERFLATARTQVLARAPASESAHGLETDLRPPLPELLDDARAVVAALTDLVV 578

Query: 353 QSVSKVADLIAEKVKEGELATRIAEPALGELGFYVQRLENL----TQVWQLMAKP-NKDK 407
              + V  L+    +E   A  +  P    +    + +E       QVW+ MA    +D 
Sbjct: 579 PLKAFVRALVKRLDEE---ADELDTPTRARIESVARSIERRALGPAQVWRDMAASIAEDP 635

Query: 408 GAPLARWLEV--SPEREGDYLVSVSPLEIGWQLDQQLWSRCVGAILVSATLRALNSFGFF 465
            A    WLE+  S  RE D  +    ++        L +R  G ++ SATLR  +  G  
Sbjct: 636 PADFVDWLELERSEGREVDIGMHRHWIDPTRPFAATLAARAHGLVVTSATLRDGSGDG-- 693

Query: 466 CRQAGISDKAEDGVQFL-------ALASPFDYP-TQGELLIPKMEMEPQAEGYTAYLAKK 517
                +S +A  G   L       ++ SPFDYP T   L+I  ++ +   +   AY    
Sbjct: 694 -EADWLSAEARAGAPHLGTPAIRASVPSPFDYPATTRVLVITDVKRDDLDQVSAAYRE-- 750

Query: 518 VLCYLQADKANLVLFASYWQMREVAESLKVEFTKRGWALQVQGEKSRSEILNKHKKLIEK 577
              +  A    L LF +  ++R V   +       G  L  Q   +    ++   ++   
Sbjct: 751 --LFRAAGGGGLGLFTAIGRLRAVHARIAPALDALGLPLLAQHVDAMD--ISTLIEIFRA 806

Query: 578 QKTSVLFGTGSFSEGLDLPGELLENLIITKIPFAVPTSPVEQAHAEYIQELGGNPFMQIT 637
           ++ + L GT +  +G+D+PG  L  ++  ++P+  P    +  H    + +GG+ +    
Sbjct: 807 EEDACLLGTDAVRDGVDVPGRSLRLIVFDRVPWPRP----DILHKARRKAMGGSLYDDRI 862

Query: 638 VPEASKKLIQSVGRLLRKERDSGRVVILDRRVVSKRYG 675
              A  +L Q+ GRL+R+  D G  V+LD R+ S+  G
Sbjct: 863 ---ARLRLKQAFGRLVRRAGDRGVFVMLDSRLPSRLGG 897