Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 690 a.a., ATP-dependent helicase DinG (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  700 bits (1806), Expect = 0.0
 Identities = 360/695 (51%), Positives = 487/695 (70%), Gaps = 10/695 (1%)

Query: 1   MLTKNIQDSIRNSYQNLQNQLENFIPRRAQNFLVAEMAKTLCGAYHKSTQMLVAEAGTGI 60
           ML  N+++ IR  Y+++   L NF PRR QNF+VAE++KTL G Y K  +++V EAGTGI
Sbjct: 1   MLPDNVKNQIRAIYKDIAASLPNFRPRREQNFMVAEISKTLAGDYDKDRRIIVVEAGTGI 60

Query: 61  GKSLSYLMAVIPVAVVNKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFILAKGRQR 120
           GKSLSY++  IP+A+ +K+KV I+TATVALQEQLL+KDLP +   S  NF F L KGRQR
Sbjct: 61  GKSLSYILGTIPLALASKKKVCIATATVALQEQLLHKDLPFFLEQSGLNFRFGLVKGRQR 120

Query: 121 YCCSERLAAACGIDDG-QIALFESKPKPHETELLAELHTALSQGKWDGDRDGWPSPISDE 179
           Y C  +LA   G D+  Q+A++++KP   +  +L  L   +++G+W+G+ D   +PI D 
Sbjct: 121 YVCLSKLAMLIGDDNSTQMAMWQTKPDNSQIAMLQTLLNDVNEGRWNGEIDTLSTPIPDH 180

Query: 180 LWSVIVSDKHSCNGSFSVHRHCPFQKARSELDKADVIIANHSLVMADADLGGGVILPAPE 239
           LW  I  DKHSC+   + HR+CPF KAR ++D  DV+IANHSL+ AD +LGGGVILP PE
Sbjct: 181 LWQQIACDKHSCHRQLASHRNCPFHKAREDVDTWDVLIANHSLLFADLELGGGVILPNPE 240

Query: 240 ETIYVFDEAHHLPTVAREHASAAATLKGAASWLEKLNQSLSKFTALGDEKRAERFAEEAR 299
           +  YV DEAHHLP VAR+ +SA ATL+GAA WLEK+ ++ +K             A+  +
Sbjct: 241 DVFYVIDEAHHLPIVARDFSSAQATLRGAADWLEKVGKTSAKLQNQIKSNNIIAPAQAMQ 300

Query: 300 TAIQYLIPTLNQLPK--QFMAEQFV--EGIYRFEHGELPQWLADESQALSKSSQKAMQSV 355
             I  LI  LNQ+        +QF   E  YRFEHG+LP  L   ++ L+ +S  A++  
Sbjct: 301 DHIGDLIGQLNQVAHYCDTQTKQFANPESRYRFEHGKLPGALKIPAENLAATSNLALKQF 360

Query: 356 SKVADLIAEKVKEGELATRIAEPALGELGFYVQRLENLTQVWQLMAKPNKDKGAPLARWL 415
           +K+  L+AE +K+G++    AE    E+GF +QRLENL ++W++MAK + +KGAP+ARW+
Sbjct: 361 NKMQLLLAEAIKDGDIPKHQAEALQAEMGFMLQRLENLQKLWKMMAKEDSNKGAPMARWI 420

Query: 416 EVSPEREGDYLVSVSPLEIGWQLDQQLWSRCVGAILVSATLRALNSFGFFCRQAGISDKA 475
           E+   ++ DYL S SP+E+G+ L+  LW +  G +L SATLRALN+F  F  Q G+S K 
Sbjct: 421 ELITGKQVDYLFSASPIEVGFMLETMLWQKAAGVVLCSATLRALNNFDHFAHQVGLSLK- 479

Query: 476 EDGVQFLALASPFDYPTQGELLIPKMEMEPQAEGYTAYLAKKVLCYLQADKANLVLFASY 535
            DG ++LAL SPFDYP    L +PKM+ EP  + YTA LA+++L  ++ + A LVLFASY
Sbjct: 480 -DGSRYLALQSPFDYPNNATLYLPKMKTEPTDDAYTAELAEQILQLIEGEMATLVLFASY 538

Query: 536 WQMREVAESLKVEFTKRGWALQVQGEKSRSEILNKHKKLIEKQKTSVLFGTGSFSEGLDL 595
           WQM +VAE L+    K    + +QG   R ++L  HK   +K + S+LFGTGSFSEGLDL
Sbjct: 539 WQMEKVAELLE---GKLALEILIQGNAPRQQLLETHKAKCDKGEPSILFGTGSFSEGLDL 595

Query: 596 PGELLENLIITKIPFAVPTSPVEQAHAEYIQELGGNPFMQITVPEASKKLIQSVGRLLRK 655
           PG+ L NLI+TK+PFAVPTSPVEQAHAEY++  GGNPF+Q+T+P+AS+KLIQS GRLLRK
Sbjct: 596 PGDYLTNLIVTKLPFAVPTSPVEQAHAEYVKIKGGNPFLQLTIPDASRKLIQSCGRLLRK 655

Query: 656 ERDSGRVVILDRRVVSKRYGKALLDALPPFKRTIE 690
           E+D GRV ILDRR+V+KRYGK+LLDALPPF+R IE
Sbjct: 656 EQDYGRVTILDRRLVTKRYGKSLLDALPPFRRVIE 690