Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 758 a.a., ATP-dependent DNA helicase from Herbaspirillum seropedicae SmR1

 Score = 44.7 bits (104), Expect = 2e-08
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 587 GSFSEGLDLPGELLENLIITKIPFAVPTSPVEQAHAEYIQELGGNPFMQITVPEASKKLI 646
           GSF EG+DLPGE L    +  +         EQ     +Q L G  +    +    +K++
Sbjct: 664 GSFGEGVDLPGERLIGAFVATLGLPQVNEVNEQLRLR-MQALFGAGYDYTYLYPGLQKVV 722

Query: 647 QSVGRLLRKERDSGRVVILDRR 668
           Q+ GR++R E D G V ++D R
Sbjct: 723 QAAGRVIRTESDQGVVWLIDER 744



 Score = 26.6 bits (57), Expect = 0.005
 Identities = 60/255 (23%), Positives = 91/255 (35%), Gaps = 58/255 (22%)

Query: 46  HKSTQMLVAEAGTGIGKSLSYLMAVIPVAVVNKRKVVISTATVALQEQLLNKDLPLYRRI 105
           H   + L+A+A TGIGK+L  L   +  A                  Q L+K L      
Sbjct: 213 HAGRRSLLAQAPTGIGKTLGTLFPALKAA----------------PRQQLDKVL------ 250

Query: 106 SDQNFSFILAKGRQRYCCSERLAAACGIDDGQIALFE----SKPKPHETELLAELHTALS 161
                 F+ AK   R    +  A   G     + + E     K   H   L       L+
Sbjct: 251 ------FLAAKTPGRQLALDAAATLKGQGVLPLRVLELSAREKACEHPERLCRGDSCPLA 304

Query: 162 QGKWDGDRDGWPSPISDELWSVIVSDKHSCNGSFSVHRHCPFQKARSELDKADVIIANHS 221
           QG +D       + +   L      D+ S       H+ CP+         +DVI+ +++
Sbjct: 305 QGFYDRLAQARAACLDAPL-----LDRASLRQIALAHQVCPYYLGSEMTRWSDVIVGDYN 359

Query: 222 LVMADADLGGGVILPAPEE-----TIYVFDEAHHLPTVAREHASA---AATLKGA----- 268
                    GG +L A  +        + DEAH+L   AR   SA    A+L+ A     
Sbjct: 360 YW-----FDGGAMLYAMAQAHDWRVSVLADEAHNLVARARGMYSAQLSRASLRAARAVAP 414

Query: 269 ---ASWLEKLNQSLS 280
              A  LEK+ ++ S
Sbjct: 415 AAVAKLLEKIGRAWS 429