Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., helicase c2 (RefSeq) from Shewanella sp. ANA-3

 Score =  227 bits (578), Expect = 2e-63
 Identities = 200/684 (29%), Positives = 316/684 (46%), Gaps = 87/684 (12%)

Query: 17  LQNQLENFIPRRAQNFLVAEMAKTLCGAYHKSTQMLVAEAGTGIGKSLSYLMAVIPVAVV 76
           L   ++ F  R++Q     EMA+ +  A       L+ EAGTG+GK+ +YL+     A++
Sbjct: 52  LAKHIQGFSARQSQ----VEMAQIISEAIASKGNALI-EAGTGVGKTFAYLIP----AIL 102

Query: 77  NKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFILAKGRQRYCCSERLAAACGIDDG 136
           + ++V++ST +  LQEQL  KDLP    +        L KGR  Y C  RL       D 
Sbjct: 103 SGKQVIVSTGSKNLQEQLFLKDLPALTSMLGIAPKLALLKGRNNYLCQHRL-------DK 155

Query: 137 QIALFESKPKPHETELLAELHTALSQGKW-----DGDRDGWPSPISDE-LWSVIVSDKHS 190
           Q+     +    E  LL +L   L   +W     DGD  G  S   +     ++VS K +
Sbjct: 156 QM----QEASHIEARLLDDL---LKINQWAGMSKDGDIGGLTSVAENSPALPLVVSTKET 208

Query: 191 CNGS-FSVHRHCPFQKARSELDKADVIIANHSLVMADA---DLGGGVILPAPEETIYVFD 246
           C G     +  C  +KAR     A +I+ NH L  AD+   D G   +LP P+  + +FD
Sbjct: 209 CLGQRCEFYDACFTRKARGRAMDAKIIVVNHHLFFADSVLKDTGFAELLPDPD--VVIFD 266

Query: 247 EAHHLPTVAREHASAAATLKGAASWLEKLNQSLSKFTALGDEKRAERFAEEARTAIQYLI 306
           EAH LP +   +    ++ +    +L+KL Q     T L D  +  +F +   T +    
Sbjct: 267 EAHLLPDICVSYFGQQSSSRTIDDYLQKLLQIYQ--TELSDTGQIAQFCQRCLTKLSDWH 324

Query: 307 PTLNQLPKQFMAEQFVEGIYRFEHGELPQWLADESQALSKSSQKAMQSVSKVADLIAEKV 366
             L                  F  GE    L   +++++ +S   +  ++ +  L+   V
Sbjct: 325 NAL------------------FSSGESDWRLQLGNKSIALASWDLLAELTALQKLLLVHV 366

Query: 367 KEGELATRIAEPALGELGFYVQRLENLTQVWQLMAKPNKDKGAPLARWLEVSPEREGDYL 426
              EL   IA   L EL   + +  N        A  + + G+                +
Sbjct: 367 GRSELLDDIAVK-LTELNHKLNQFFNCDNP---QAAYSVEFGSRFV-------------M 409

Query: 427 VSVSPLEIGWQLDQQLWSRCVGAILVSATLRALNSFGFFCRQAGISDKAEDGVQFLALAS 486
           + +SP+ I  +  QQL+      I  SATL+   S   F ++ GISD          L S
Sbjct: 410 LRMSPINIAREC-QQLFVANTSWIFTSATLQVNRSLDHFAQELGISDAKAH-----ILDS 463

Query: 487 PFDYPTQGELLIPKM--EMEPQAEGYTAYLAKKVLCYLQADKANLVLFASYWQMREVAES 544
           PFDYP Q    +P+    +  Q +     +   V     A     +LF S+  + + A +
Sbjct: 464 PFDYPRQALFCVPRQLGNVTNQQQALKQLVDVCVKAIEAAQGRTFILFTSHKMLEQTALA 523

Query: 545 LKVEFTKRGWALQVQGEKSRSEILNKHKKLIEKQKTSVLFGTGSFSEGLDLPGELLENLI 604
           L+   T+  + L VQG+  +  +L K ++L      +VL GT SF EG+D+ G+LL  +I
Sbjct: 524 LR---TRTQYPLLVQGQAGKQSLLTKFRQL----GNAVLLGTSSFWEGVDVRGKLLSCVI 576

Query: 605 ITKIPFAVPTSPVEQAHAEYIQELGGNPFMQITVPEASKKLIQSVGRLLRKERDSGRVVI 664
           I K+PF  P  P+ +A A+ I   GG+PF Q+++P+A   L Q VGRL+R E+D G +++
Sbjct: 577 IDKLPFVSPDEPLYRARADNISRQGGDPFTQVSLPQAIIALKQGVGRLIRDEKDCGVLIL 636

Query: 665 LDRRVVSKRYGKALLDALPPFKRT 688
            D R+V++ YG+A L++LPP  RT
Sbjct: 637 CDNRIVNRAYGQAFLNSLPPMSRT 660