Pairwise Alignments

Query, 368 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., OmpK36 porin from Klebsiella michiganensis M5al

 Score = 47.4 bits (111), Expect = 6e-10
 Identities = 69/267 (25%), Positives = 102/267 (38%), Gaps = 51/267 (19%)

Query: 25  MKKTLLALAV--LAAAGSVNAAEILKSDAGTVDFYGQLRTELKFLEDKDPTIGSGSSRAG 82
           MK  +L+L V  L  AG+ NAAE+   D   +D YG++     F +DK         R G
Sbjct: 1   MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKIDGLHYFSDDKGQDGDQTYMRLG 60

Query: 83  VDANYTVNDSLALQGKVEFALK------DSGDMYVRNHILGVK-TNFGKFSFGKQWTTSD 135
           +     +ND L   G+ E+ ++       S   + R    G+K  + G F +G+ +    
Sbjct: 61  IKGETQINDQLTGYGQWEYNVQANNTESSSDQAWTRLAFAGLKFGDAGSFDYGRNYGVVY 120

Query: 136 DVYG-ADYSYFFGGTGLRYGTLSDALHDSQVKYV---YEADSFWVKAGYGF--------- 182
           DV    D    FGG    YG  SD    S+   V     +D F +  G  F         
Sbjct: 121 DVTSWTDVLPEFGGD--TYG--SDNFLQSRANGVATYRNSDFFGLVDGLNFALQYQGKNG 176

Query: 183 --------PEDNAKQELA------------ELYVGATFGDLAVHA--GGGQNRDKAFKVG 220
                   P +N +  L             ++Y G + G    ++   G QN   A   G
Sbjct: 177 SVSGEGTSPTNNGRGALKQNGDGYGTSLTYDIYDGISAGFAYANSKRNGDQNSQLALGQG 236

Query: 221 SNTVGTTTTDIKADVTNSYFEVTGEYT 247
            N   T T  +K D  N Y  +  +YT
Sbjct: 237 DN-AETYTGGLKYDANNIY--LASQYT 260