Pairwise Alignments

Query, 404 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 705 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 42.4 bits (98), Expect = 4e-08
 Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 62  LGFVNFPYQSLLNMVPTLFPVKSLVVEILEDC--PPTPELLSAIKKMAQLGYKIALDDF- 118
           L  V+F  Q +  +     P ++L++EI E        +    ++++  LG  IA+DDF 
Sbjct: 549 LEHVDFVGQVVNALEMVALPAEALILEITESALLRQPEQARHTLERIKALGVGIAIDDFG 608

Query: 119 --IPSNDWKAFLPYISI---IKFDIRLVPIPKAKL---FINKLRSMKIEFLAEKVETYEE 170
             + S      LP  S+    +F +RL      KL    +   +++ I F+AE +ET ++
Sbjct: 609 TGLSSLSRLGTLPIDSVKIDAEFALRLTDASGQKLCHAIVQLAQALGIHFVAEGIETQQQ 668

Query: 171 FEQAKQAGFHYFQGYFFSKPEIIQR 195
            +     G  + QG+ F  P  +++
Sbjct: 669 KDIITHMGQGFAQGFLFGYPSYVEQ 693