Pairwise Alignments

Query, 404 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 62.8 bits (151), Expect = 1e-14
 Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 18/224 (8%)

Query: 188 SKPEIIQRKALQ-PSFLTIVQLLKEVAKPEVDFREIETIVAKDISLSYKLLTFVNSSATV 246
           + P++I  K L+ PS   +++L +++A P+ D +++  ++ +D  LS ++L   NS A  
Sbjct: 9   ASPQLIAEKVLKLPS--KVLELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNSPAFK 66

Query: 247 SSK--IQSFRQALVYLGQQKLRKFISLVAIASTQDSKPDYL--YNLAILRARF------C 296
             +  + S +QALV LG+++LR+F++   +    D KP Y   +   I R          
Sbjct: 67  RGEREVTSLQQALVQLGREQLRRFVTSSLVREMLDIKPIYFRRFGAEIWRHSMQVAFLAS 126

Query: 297 EMLSERVPTNIAPGTGFLTGMFSVLDSLLDQSLDSIVKEMPIEEEVKQALTQGSGTLGQI 356
           E+  E   T    G     G  ++   LLD  + +   E P     +Q +T  S TL  +
Sbjct: 127 ELSEEDRDTAFLLGLLHDVGKLAIFKMLLDAFVQAEPGEQPNSWLFRQVMTAKSLTLSAL 186

Query: 357 LALNKAYEMADWGQVVTLGQALNLPNEAPTECYIEAVKWTADLL 400
           LA +         ++  L      PNE      I AV W A+++
Sbjct: 187 LAKHWQLPSTFETELDKLAHVHTRPNEG-----IAAVVWRANVI 225