Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., cysteinyl-tRNA synthetase from Synechococcus elongatus PCC 7942

 Score =  373 bits (958), Expect = e-108
 Identities = 209/480 (43%), Positives = 284/480 (59%), Gaps = 28/480 (5%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
           L +YN+LTRQK+ F+P+ AG V +Y CGVT+YD CH+GH R+++ +D + RYL +LGY +
Sbjct: 3   LSLYNTLTRQKQRFEPLQAGSVSLYCCGVTVYDYCHLGHARSYIVWDTLRRYLLWLGYRV 62

Query: 62  TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
            +V+N TDIDDKI++R+ +   T +++ +R  Q  + D   LNI   D  PRAT  ++ I
Sbjct: 63  RYVQNFTDIDDKILRRSRQEGTTMQAIADRYTQAYFEDMARLNILEADDYPRATHTLDGI 122

Query: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRS---- 177
             L+  L ++GFAY AD GDV F V ++ +YGKLS + L+ L+AGA   +E+A+ S    
Sbjct: 123 QRLIAELEDKGFAYAAD-GDVYFSVRRFQDYGKLSGRKLEDLKAGASGRVESAEESLKHD 181

Query: 178 PLDFVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHEN 237
           P DF LWK +KP EP W+SPWG GRPGWHIECSAM    LG   DIH GG+DL FPHHEN
Sbjct: 182 PFDFALWKAAKPEEPAWDSPWGPGRPGWHIECSAMVRDRLGDSIDIHVGGADLVFPHHEN 241

Query: 238 EIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVL--GHYDAETVRYFLMS 295
           EIAQS           W+H+GMV V  EKMSKSLGNF TIR +L  G      +R F++ 
Sbjct: 242 EIAQSEAVTGHPLARYWLHNGMVNVGGEKMSKSLGNFTTIRQLLDEGGISPMVLRLFVLQ 301

Query: 296 GHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVT-------RFTAAMND 348
            +YR  +++++E L   +   E L   L   +      G  E VT       RF  AM+D
Sbjct: 302 ANYRKPIDFTDEALQACQNGWETLQEGLHFGEHWGDRLGWTESVTVDPDLSDRFRMAMDD 361

Query: 349 DFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMR---------ELADVIGILYQEPE 399
           D NTP A +VLF++A+E+ R ++  +      G   +         +LA V+G L  EPE
Sbjct: 362 DLNTPAALAVLFELAKELRRQQNLLIHEGHLDGDAQQLHQHWVTLVQLAGVLG-LEAEPE 420

Query: 400 AFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNG-TTWRR 458
                   + D A IE  I  R+ +R  KD+A AD  R  L ++GI L D   G T W R
Sbjct: 421 L---AETNELDEAAIEDWIAKRHAARQAKDFAEADRIRHYLADLGITLIDQAGGITRWSR 477