Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., Cysteine--tRNA ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  420 bits (1080), Expect = e-122
 Identities = 222/461 (48%), Positives = 299/461 (64%), Gaps = 9/461 (1%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
           L I+N++TR KE F+P+  G V +YVCG T+YD  HIG+ R  + FD++AR LR L   +
Sbjct: 3   LHIHNTMTRTKEVFEPLDPGHVRLYVCGPTVYDRAHIGNARPVIVFDLLARLLRRLYPQV 62

Query: 62  TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
           T+VRNITD+DDKI  RA+ +  T   +TE   +  + D   L    PDVEPRATA+I ++
Sbjct: 63  TYVRNITDVDDKINARASASGRTIGEITEETTRLFHEDMAELGALPPDVEPRATAHIADM 122

Query: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
           +A++ERLI +G AY A+ G V+F V     YG LS + +D + AGARV++   KR P DF
Sbjct: 123 VAMIERLIAKGHAYEAE-GHVLFSVPSMGAYGSLSGRSMDDMIAGARVEVAPYKRDPADF 181

Query: 182 VLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENEIAQ 241
           VLWK S    P W+SPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FPHHENEIAQ
Sbjct: 182 VLWKPSDASLPGWDSPWGRGRPGWHIECSAMSSRYLGPSFDIHGGGLDLIFPHHENEIAQ 241

Query: 242 S-CCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRS 300
           S CC     +   WMH+G +MV+ EKMSKSLGNF T+RD+L     E +R  ++  HYR 
Sbjct: 242 SVCCNGPGTFARYWMHNGYLMVEGEKMSKSLGNFVTVRDLLDQAPGEAMRLAMLGTHYRQ 301

Query: 301 QLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAAMNDDFNTPEAYSVLF 360
             +++ E L QAR  L+RLY+ALR +  +  AA   E      AA+ DD NTP+A + ++
Sbjct: 302 PFDWTAEGLEQARRGLDRLYSALRRV--AGIAASPAEVPEGVMAALCDDLNTPKALAEVY 359

Query: 361 DMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDED---AAQIEAL 417
           D+   +NR  + +   A A G+L+   A ++G+   +PE +  G+   E+   AA++E L
Sbjct: 360 DLLGVLNRATTTE-EQAKAKGALLAAGA-LLGLFQADPEVWLCGAGTGEEEGLAARVEDL 417

Query: 418 IKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGTTWRR 458
           I  R  +R  +D+A AD  RD+L + GIVLEDGPNGTTWR+
Sbjct: 418 ICQRKAARQARDFARADAIRDELTQAGIVLEDGPNGTTWRK 458