Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., cysteine--tRNA ligase from Rhodopseudomonas palustris CGA009

 Score =  335 bits (860), Expect = 1e-96
 Identities = 204/487 (41%), Positives = 278/487 (57%), Gaps = 62/487 (12%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60
           L++Y++LTR K  F PI    V MYVCG T+YD  HIG+ R  + FDV+ R LR+L  + 
Sbjct: 3   LRLYDTLTRDKRPFTPIDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGEA 62

Query: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113
            + +VRNITD+DDKI  RAA +       E    +TE+  ++ + D DAL   RP VEPR
Sbjct: 63  HVKYVRNITDVDDKINDRAARDYPGLPLNEAIRKVTEQTERQFHDDVDALGCLRPTVEPR 122

Query: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYS-------EYGKLSKQDLDQLQAG 166
           AT +I E+ +++E+L+  GFAYV +   V+F  S  +        YG L+ + LD++ AG
Sbjct: 123 ATEHIGEMRSIIEKLVAGGFAYV-EQDHVLFSPSAMNAANGVLPRYGSLANRSLDEMIAG 181

Query: 167 ARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWG---SGRPGWHIECSAMNSSILGTHFDI 223
           ARVD+   KR   DFVLWK SKPGEP+W SP G    GRPGWHIECSAM+   LG  FDI
Sbjct: 182 ARVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATPGRPGWHIECSAMSWKHLGETFDI 241

Query: 224 HGGGSDLQFPHHENEIAQSCCA-HDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG 282
           HGGG DL FPHHENE+AQSCCA H  +   TWMH+G + V+ EKMSKSLGNF TIR++L 
Sbjct: 242 HGGGIDLVFPHHENEVAQSCCAFHTERMAQTWMHNGFLQVEGEKMSKSLGNFITIRELLA 301

Query: 283 -------HYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGG 335
                   +D  T+R  ++  HYR  ++++ + L++A  ++         LD S  A   
Sbjct: 302 TNKFGGRSWDGATLRLAMLKTHYRQPIDWTVDALHEAEKAI---------LDWSDFAKDA 352

Query: 336 EEY-VTRFTAAMNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGIL 394
                    AA+ DD NTP+       M  E++ L+     +         EL   + +L
Sbjct: 353 TPVRCDEVIAALTDDLNTPK-------MIAELHALRRAGKAD---------ELRGAMQLL 396

Query: 395 YQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNG- 453
              P       A  +  A  ++LI+ R  +RA KDW  +D  RD+L  MG+VL+DG +  
Sbjct: 397 GINPVV----RAPVDLDATAKSLIEARTAARANKDWKESDRIRDELAAMGVVLKDGKDAD 452

Query: 454 ----TTW 456
               TTW
Sbjct: 453 GKSVTTW 459