Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., cysteinyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  735 bits (1898), Expect = 0.0
 Identities = 346/459 (75%), Positives = 396/459 (86%)

Query: 1   MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
           MLK+YNSLTRQKEEFKPI  GKVGMYVCGVTIYDLCHIGHGRTFV+FD++ RYLRY+GYD
Sbjct: 1   MLKLYNSLTRQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVAFDMIVRYLRYIGYD 60

Query: 61  LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEE 120
           + F RNITD+DDKIIKRA EN E+C++LTERL QEMY DFDALN+KRPD EPRAT ++ E
Sbjct: 61  VNFHRNITDVDDKIIKRATENGESCDALTERLTQEMYHDFDALNMKRPDFEPRATQHMPE 120

Query: 121 IIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLD 180
           II +VERL+ER  AY+ADNGDV+F V+ + EYG+LS Q+LDQLQAGARV+++  KR P+D
Sbjct: 121 IIEMVERLLERDHAYIADNGDVLFSVASFPEYGRLSGQNLDQLQAGARVEVDENKRDPMD 180

Query: 181 FVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENEIA 240
           FVLWKMSKPGEPTW+SPWG GRPGWHIECSAMNS  LG HFDIHGGGSDLQFPHHENEIA
Sbjct: 181 FVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGEHFDIHGGGSDLQFPHHENEIA 240

Query: 241 QSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRS 300
           QSCCAHDT YVN WMH+GMVMVDKEKMSKSL NFFTIRDVL HYDA TVRYFL+SGHYRS
Sbjct: 241 QSCCAHDTPYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLAHYDASTVRYFLLSGHYRS 300

Query: 301 QLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAAMNDDFNTPEAYSVLF 360
           QLNYSE+NL QA+A+LERLY AL+GLD SV AA   EYV +F  AM+DDFNTPEAYSVLF
Sbjct: 301 QLNYSEDNLKQAKAALERLYTALKGLDLSVEAAPASEYVAKFKEAMDDDFNTPEAYSVLF 360

Query: 361 DMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDEDAAQIEALIKL 420
           DMAREINRLK +D+  ASALG  M++L DV+GIL Q+ + FF+G   D++ AQIEALI  
Sbjct: 361 DMAREINRLKVDDLAAASALGVSMKQLGDVLGILEQDVDGFFKGEGSDDEVAQIEALIAE 420

Query: 421 RNDSRATKDWANADLARDKLNEMGIVLEDGPNGTTWRRK 459
           RN +R  KDWA AD+ARD LN +G++LEDGP GTTWR+K
Sbjct: 421 RNRARTEKDWAAADVARDGLNALGVILEDGPEGTTWRKK 459