Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., cysteinyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  439 bits (1129), Expect = e-127
 Identities = 230/482 (47%), Positives = 308/482 (63%), Gaps = 27/482 (5%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
           +++YN+LTR+KE F+P V GKV MYVCG+T YDLCHIGH R+ V FDV+ RYLR+ G D+
Sbjct: 1   MQLYNTLTRKKEHFEPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDV 60

Query: 62  TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
           TF RN TD+DDKII RA +   T + + E+ I   Y D D LN+ R D+EPRAT +IEE+
Sbjct: 61  TFARNFTDVDDKIITRANQEGLTSQEVAEKYIATFYEDMDRLNVLRADLEPRATTHIEEM 120

Query: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
           I+L  RLIE+  AY   +GDV F V  +  YGKLS +D+D L++GARV     K  PLDF
Sbjct: 121 ISLCVRLIEQDKAYATPSGDVYFRVRAFPGYGKLSGRDVDDLRSGARVAPGEEKEDPLDF 180

Query: 182 VLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENEIAQ 241
            LWK +KPGEP WESPWG+GRPGWHIECSAM+   L    DIHGGG DL FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPFWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFPHHENEIAQ 240

Query: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
           +  A    +V  W+H+G V V+ EKMSKSLGNF TIRD+L +Y  ET+RYFL++ HYRS 
Sbjct: 241 TEAALGKDFVRYWVHNGFVQVNAEKMSKSLGNFRTIRDILENYLPETLRYFLLTKHYRSP 300

Query: 302 LNYSEENLNQARASLERLYNAL----RGLDRS------VPAAGGEEYV---TRFTAAMND 348
           ++++ E++++A  +L+R+Y AL      L+R       +P    EE+      F  AM D
Sbjct: 301 IDFTFESMDEAEKNLKRIYEALGLLHAELEREKWTSGPLPKDVTEEFEGLRQAFADAMED 360

Query: 349 DFNTPEAYSVLFDMAREINR-LKSEDMTNASALGSLMRELAD-------VIGILYQEPEA 400
           D NT  A   +F M R  NR L ++         +  R + D       V+G+  +EP  
Sbjct: 361 DMNTAAALGHVFTMVRLANRILDNKGQRKTEGARAFFRAVLDEAATWFAVLGVFGREPAG 420

Query: 401 FF------QGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGT 454
           F       + + +  D A++E L++ R ++RA KD+A AD  RD++  +GI + D P+G 
Sbjct: 421 FLAELRACRVARKGIDPAKVEELLQARINARADKDFARADAIRDEIAALGIEVRDTPSGA 480

Query: 455 TW 456
            W
Sbjct: 481 VW 482