Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., cysteine--tRNA ligase from Methanococcus maripaludis JJ

 Score =  428 bits (1101), Expect = e-124
 Identities = 216/474 (45%), Positives = 305/474 (64%), Gaps = 17/474 (3%)

Query: 1   MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
           MLK+YN+LTR++EEFK +   +V MYVCG T+YD  H+GHGRT+VSFD++ RYL ++GY 
Sbjct: 1   MLKVYNTLTRKEEEFKTLNKNEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHIGYT 60

Query: 61  LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEE 120
           +  V N TDIDDKIIKRA E  +  + ++E+ I+    D   L +K  D+ P+ T +I E
Sbjct: 61  VNLVINFTDIDDKIIKRAYEKGKDPKEISEQFIKVFLDDMATLKVKPADIYPKVTEHISE 120

Query: 121 IIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLD 180
           IIA +ERLIE+GFAY  ++G V FEV ++  YGKLS  +L+ L +GARV+    K++  D
Sbjct: 121 IIAFIERLIEKGFAYKTEDG-VYFEVKKFKNYGKLSNINLEDLVSGARVETSEKKKNQKD 179

Query: 181 FVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENEIA 240
           F LWK +KPGEP WESP+G GRPGWHIECSAM+S  LG  FDIHGGG DL FPHHENEIA
Sbjct: 180 FALWKTAKPGEPKWESPFGKGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENEIA 239

Query: 241 QSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRS 300
           QS       +VN W+H+G VMV+ EKMSKSLGNF TI D+   Y  E +R+F +  HYRS
Sbjct: 240 QSSAYSGKDWVNYWIHTGFVMVNGEKMSKSLGNFITIGDISKEYSPEILRFFFIQRHYRS 299

Query: 301 QLNYSEENLNQARASLERLYNALRGLDRSVPAA------GGEEYV---------TRFTAA 345
            ++Y+ E++N  + +LE++YN +  +  S+  +      G  E++           F  A
Sbjct: 300 PIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRIWGENEFLLYDILKNSKNNFYNA 359

Query: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405
           MN DFNT EA   +F+++  +N+  S   T +  L     +   +IG ++   E +F+ S
Sbjct: 360 MNSDFNTVEALKSVFEVSNGVNKYLSLTETPSEGLLLKALDFYKIIGEIFGLFENYFKES 419

Query: 406 AEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGP-NGTTWRR 458
           +E  +   ++ LI+LR+D R  K++  +D  RD L  +G  +ED P  GT +++
Sbjct: 420 SESNEEEFVKFLIELRSDLRLQKNYEMSDKIRDGLKNLGYQIEDNPKEGTVFKK 473