Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., cysteinyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  450 bits (1158), Expect = e-131
 Identities = 235/482 (48%), Positives = 307/482 (63%), Gaps = 27/482 (5%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
           ++IYNSL+R+KE F P V GKV MYVCG+T YDLCHIGH R+ V FDV+ RYLR+ G D+
Sbjct: 1   MQIYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLDV 60

Query: 62  TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
           TF RN TD+DDKIIKRA E   T + + E+ I   Y D D LN+ R D+EP+AT +I E+
Sbjct: 61  TFARNFTDVDDKIIKRANEEGLTSQQVAEKYIDTFYEDMDRLNVLRADIEPKATGHILEM 120

Query: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
           IAL E+LI +G AY   +GDV F V  + EYGKLS +D+D +++GARV     K  PLDF
Sbjct: 121 IALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGEEKEDPLDF 180

Query: 182 VLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENEIAQ 241
            LWK +KPGEP+W SPWG GRPGWHIECSAM+   +    DIHGGG DL FPHHENEIAQ
Sbjct: 181 ALWKAAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFPHHENEIAQ 240

Query: 242 SCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQ 301
           +  A D  +V  WMH+G V VD EKMSKSLGNF TIRD+L  Y  E +R+FL++ HYRS 
Sbjct: 241 TEAALDKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILEGYLPEVLRFFLLTKHYRSP 300

Query: 302 LNYSEENLNQARASLERLYNA--LRGLDRS--------VPAAGGEEYVT---RFTAAMND 348
           ++++ +++++A  SL+R+Y A  L   +RS        +PA    E+ T    F  A+ D
Sbjct: 301 IDFTFDSMDEAEKSLKRIYEALSLARTERSRSKWSATPLPADVTAEFDTLDRAFDEALED 360

Query: 349 DFNTPEAYSVLFDMAREINRLKSEDMTNASA--------LGSLMRELADVIGILYQEPEA 400
           D NT  A   +F   R +NRL  +     SA        L  L+ +   V+G+  +EPEA
Sbjct: 361 DLNTAAALGHVFGTIRLVNRLLEDKNLRKSAETLALLERLDGLVAKWMKVLGVFGREPEA 420

Query: 401 FFQGSAEDE------DAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGT 454
           F     E        D  +++AL++ R   RA KD+A AD  RD+L  +GI + D P+G 
Sbjct: 421 FLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRDELAALGIEVRDTPSGA 480

Query: 455 TW 456
            W
Sbjct: 481 VW 482