Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., cysteinyl-tRNA synthetase from Caulobacter crescentus NA1000

 Score =  404 bits (1038), Expect = e-117
 Identities = 211/462 (45%), Positives = 297/462 (64%), Gaps = 6/462 (1%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYL-GYD 60
           LKI+++LTR+K +F P    +V MYVCG T+Y+  HIG+ R  V FDV+ R LR+L G D
Sbjct: 3   LKIHDTLTREKRDFVPADPQRVTMYVCGPTVYNYAHIGNFRPVVVFDVLFRVLRHLYGED 62

Query: 61  -LTFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIE 119
            + + RN+TD+DDKI ++AA+       +T+R +   + D DAL   RP +EP+AT +I 
Sbjct: 63  AVVYARNVTDVDDKINQKAADEGVPISVITDRYLAAYHQDADALGALRPTLEPKATEHIG 122

Query: 120 EIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPL 179
            I+ ++ +L+E G AY A+ G V+F+   +++YG+LS + LD++ AGARV++   KR P 
Sbjct: 123 AILEMIGQLVENGSAYAAE-GHVLFDTQSFADYGQLSGRPLDEMIAGARVEVAPYKRHPA 181

Query: 180 DFVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENEI 239
           DFVLWK SK  EP WESPWG+GRPGWHIECSAM    LG   DIH GG DL FPHHENE+
Sbjct: 182 DFVLWKPSKENEPEWESPWGAGRPGWHIECSAMIDKALGQTIDIHAGGIDLTFPHHENEV 241

Query: 240 AQSCCAHDTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHY 298
           AQS CAH T  + N WMH+G + +  EKMSKSLGN     ++L     E +R+ L+S HY
Sbjct: 242 AQSRCAHKTSVLANYWMHNGFLDMSGEKMSKSLGNVIIPHELLETTPGEVIRWALLSAHY 301

Query: 299 RSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAAMNDDFNTPEAYSV 358
           R  L+++ E L Q++ SL+RLY ALR   + V      E      +A+ DD NTP A S 
Sbjct: 302 RQPLDWTPELLEQSKKSLDRLYGALRRA-KDVAPDQAMEAPAEVMSALMDDLNTPLATSA 360

Query: 359 LFDMAREINR-LKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDEDAAQIEAL 417
            F+++  I + + + D    +A  + + E   ++G L  +P+A+F+G A DE  AQ+E L
Sbjct: 361 FFEVSSAIEKAVTAGDTVAIAANKARLLEAGALLGFLQADPDAWFEGDASDELKAQVEDL 420

Query: 418 IKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGTTWRRK 459
           +  R  +RA KDW+ AD  R +L+ +G+V+ DGP G TWR K
Sbjct: 421 LAKRVAARAAKDWSAADAIRGELDALGVVVMDGPAGATWRMK 462