Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., cysteinyl-tRNA synthetase from Paraburkholderia bryophila 376MFSha3.1

 Score =  494 bits (1271), Expect = e-144
 Identities = 255/467 (54%), Positives = 322/467 (68%), Gaps = 16/467 (3%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
           L+IYN+L R K+ F P+ AG V MYVCG+T+YD CHIGH R  V FD+V R+LR LGY++
Sbjct: 4   LRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHIGHARVMVVFDIVQRWLRTLGYNV 63

Query: 62  TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
           T+VRNITDIDDKII+RA EN ET +SLT+R I  ++ D DAL I+RPD+EPRAT +I ++
Sbjct: 64  TYVRNITDIDDKIIRRAVENGETIKSLTDRFIHALHEDADALGIERPDIEPRATDFIPQM 123

Query: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
           + ++E+L   G+AY A +GDV + V +++ YGKLS + L+ L+AG RV    AK  PLDF
Sbjct: 124 LGMIEKLEANGYAYQASDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAANDAKEDPLDF 183

Query: 182 VLWKMSKPGEPT---WESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENE 238
           VLWK SK GEP    W+S +G GRPGWHIECSAM  ++LG  FDIHGGG DLQFPHHENE
Sbjct: 184 VLWKQSKAGEPADTGWDSKYGRGRPGWHIECSAMGCTLLGERFDIHGGGQDLQFPHHENE 243

Query: 239 IAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHY 298
           IAQS  A    +VN WMH+G V +D EKMSKSL NFFTIR+VL  YDAE VR+F+   HY
Sbjct: 244 IAQSEAATGQTFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRFFIARAHY 303

Query: 299 RSQLNYSEENLNQARASLERLYNALRGLDRSVPAAG-GEEYVTRFTAAMNDDFNTPEAYS 357
           RS LNYS+ +++ AR +L RLY AL+ +     A    E +  RF AAMNDDFNTP A S
Sbjct: 304 RSPLNYSDVHIDDARNALGRLYTALKDVTPDGAALDWNEMHAQRFQAAMNDDFNTPVAVS 363

Query: 358 VLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDE-----DAA 412
           VLF++A E+NR      T   AL   +R L  V+G+L +EP A+ Q +A        + A
Sbjct: 364 VLFELATEVNR------TRDPALARQLRSLGAVLGLLGREPRAYLQQAAGAAVQGALEPA 417

Query: 413 QIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNG-TTWRR 458
            IEA I  R  ++  KD+A AD  R +L E G+ LED P G T WRR
Sbjct: 418 AIEAKIAERVAAKQAKDYAAADRIRAELLEAGVALEDKPGGLTEWRR 464