Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., cysteinyl-tRNA synthetase from Burkholderia phytofirmans PsJN

 Score =  274 bits (701), Expect = 4e-78
 Identities = 177/471 (37%), Positives = 247/471 (52%), Gaps = 32/471 (6%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
           L++Y++ TR   EF PI    VG+Y CG T+YD  HIG+ RT+V  DV+ R L   GY++
Sbjct: 3   LRLYDTWTRTVREFTPIHPDHVGLYCCGPTVYDHAHIGNLRTYVFEDVLRRALVLNGYNV 62

Query: 62  TFVRNITDI----------DDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVE 111
             V NITD+          +DK+ K +    E+  ++ ER       D+ ALN+  P + 
Sbjct: 63  RHVVNITDVGHLVSDADEGEDKMEKGSRRTGESAWAIAERYTAAFMNDWRALNLLEPALW 122

Query: 112 PRATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDI 171
            RAT +I E I  +  L   GF Y   +G V F+ S+  +YG L++ D+  LQAG RV  
Sbjct: 123 CRATDHIAEQIDFIAELERNGFTYRTADG-VYFDTSRQDDYGYLARLDVAGLQAGKRV-A 180

Query: 172 EAAKRSPLDFVLWKMSKPG---EPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGS 228
              K+   DF LWK S PG   +  W+SPWG G PGWHIECSAM++  L   FDIH GG 
Sbjct: 181 PGEKQRATDFALWKFSPPGATRQMEWDSPWGRGFPGWHIECSAMSAKYLSPWFDIHCGGE 240

Query: 229 DLQFPHHENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGH-YDAE 287
           D    HH NEIAQ+   + T+  N WMH   +++D  KMSKS G+F  ++ +     D  
Sbjct: 241 DHIPVHHSNEIAQTQARYGTRLANFWMHGHFLLLDAGKMSKSGGDFLRLQTLSERGNDPL 300

Query: 288 TVRYFLMSGHYRSQLNYSEENLNQARASLERLYNA-LRGLDRSVPAAGGEEYVTRFTAAM 346
             RY  +S HYRS L +SE  L+ A+A+L+RL  +  R      P A     V RF A +
Sbjct: 301 AYRYLCLSAHYRSSLRFSEAALDAAQAALDRLRRSYARWPQGGKPDAAS---VARFKAEV 357

Query: 347 NDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSA 406
           + D N P A +VL+D+ R        D+  A+   S+     D   ++     A ++   
Sbjct: 358 DHDLNLPRALAVLWDVVR-------SDLPPATRRASV-----DCFDVVLGLGLADWKDVD 405

Query: 407 EDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGTTWR 457
             E  A+I AL   R  +RA K W+ AD  RD +   G ++ED   G   R
Sbjct: 406 TPELPAEIAALADQRERARAAKQWSEADRLRDVMTAAGWLVEDSAGGQVLR 456