Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., cysteinyl-tRNA synthetase from Burkholderia phytofirmans PsJN

 Score =  497 bits (1280), Expect = e-145
 Identities = 254/467 (54%), Positives = 325/467 (69%), Gaps = 16/467 (3%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
           L+IYN+L R K+ F P+  G V MYVCG+T+YD CH+GH R  V FD+V R+LR LGYD+
Sbjct: 4   LRIYNTLARDKQTFVPLQEGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGYDV 63

Query: 62  TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
           T+VRNITDIDDKII+RA EN ET ++LT+R I  ++ D DAL I+RPD+EPRAT +I ++
Sbjct: 64  TYVRNITDIDDKIIRRAVENGETIKALTDRFIDALHEDADALGIQRPDLEPRATDFIPQM 123

Query: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
           + ++E+L   G+AY A +GDV + V +++ YGKLS + L+ L+AG RV    AK+ PLDF
Sbjct: 124 LGMIEQLEANGYAYQASDGDVNYAVRKFANYGKLSGKSLEDLRAGERVAANDAKQDPLDF 183

Query: 182 VLWKMSKPGEPT---WESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENE 238
           VLWK +KP EP    W+S +G GRPGWHIECSAM  ++LG HFDIHGGG DLQFPHHENE
Sbjct: 184 VLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQDLQFPHHENE 243

Query: 239 IAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHY 298
           IAQS  A    +VN WMH+G V +D EKMSKSL NFFTIR+VL  YDAE VR+F+   HY
Sbjct: 244 IAQSEAATGQTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLAQYDAEVVRFFIARAHY 303

Query: 299 RSQLNYSEENLNQARASLERLYNALRGLDRSVPAAG-GEEYVTRFTAAMNDDFNTPEAYS 357
           RS LNYS+ +++ AR +L RLY AL+ +          E +  RF AAMNDDFNTP A S
Sbjct: 304 RSPLNYSDVHIDDARNALARLYTALKDVTPDAAELDWNEAHAQRFQAAMNDDFNTPVAVS 363

Query: 358 VLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQ---GSAEDE--DAA 412
           VLF++A E+NR      T   AL   +R L  VIG+L +EP A+ Q   G+A +   + A
Sbjct: 364 VLFELATEVNR------TRDPALARQLRSLGAVIGLLGREPRAYLQQAAGAAAEGALEPA 417

Query: 413 QIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGTT-WRR 458
            IEA I  R  ++  KD+A AD  R +L E G+ LED P G+T WRR
Sbjct: 418 AIEAKIAARVAAKQAKDYAAADRIRAELLEAGVALEDKPGGSTEWRR 464