Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 940 a.a., isoleucyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score = 42.7 bits (99), Expect = 5e-08
 Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 8/121 (6%)

Query: 214 SSILGTHFDIHGGGSDLQFPHHENE--------IAQSCCAHDTQYVNTWMHSGMVMVDKE 265
           +S++G   + HG G DL     +          +  +       Y     H   V     
Sbjct: 545 ASVVGARPEFHGHGVDLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGR 604

Query: 266 KMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRG 325
           KMSKS+GN    + V     A+ +R ++ +  Y  ++  S+E LN++  +  R+ N  R 
Sbjct: 605 KMSKSIGNVIAPQQVTNKLGADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTARF 664

Query: 326 L 326
           L
Sbjct: 665 L 665



 Score = 26.6 bits (57), Expect = 0.004
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 16/112 (14%)

Query: 37  HIGHGRTFVSFDVVARYLRYLGYDLTFVRN--------ITDIDDKIIK-----RAAENAE 83
           HIGH    +  D++ +     G+D  +V             ++ K+ K      AAE  E
Sbjct: 65  HIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQKVGKPGQKISAAEFRE 124

Query: 84  TCESLTERLIQEMYADFDALNIKRPDVEPRAT---AYIEEIIALVERLIERG 132
            C       +    ADF  L +     +P  T   A    I+  + ++IE G
Sbjct: 125 ECRKYAAEQVDGQRADFIRLGVLGDWQKPYLTMDFATEANIVRSLSKVIENG 176