Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 201 a.a., Holliday junction DNA helicase, RuvA subunit from Pseudomonas stutzeri RCH2

 Score =  224 bits (571), Expect = 8e-64
 Identities = 111/205 (54%), Positives = 152/205 (74%), Gaps = 5/205 (2%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MIGRLRGTL EK PP ++++V GIGYEV++PM+ +Y LP +GE   ++TH VVREDAQLL
Sbjct: 1   MIGRLRGTLAEKQPPHLILDVNGIGYEVEVPMTTLYRLPAVGEPLTLHTHLVVREDAQLL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           YGF    ER LFRE+I+ NGVGPK+ LA++SG+  ++ V CV+ +D S L+++PGVGKKT
Sbjct: 61  YGFAEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSVLVRIPGVGKKT 120

Query: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVD-STPVIAQNAQEEAMSALLALGYKPPQAS 179
           AERL+VE+KDR K W A     PA     V+  +     +A+ +A+SAL++LG+KP +AS
Sbjct: 121 AERLLVELKDRFKAWEA----MPAIATFVVEPGSKTAVTSAENDAVSALISLGFKPQEAS 176

Query: 180 KAVSQVAKAGMSSEELIREALKSMV 204
           +AVS + +  +SSEE+IR ALK MV
Sbjct: 177 RAVSAIQEDDLSSEEMIRRALKGMV 201