Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., Holliday junction DNA helicase subunit RuvA from Pseudomonas syringae pv. syringae B728a

 Score =  220 bits (561), Expect = 1e-62
 Identities = 108/203 (53%), Positives = 148/203 (72%), Gaps = 2/203 (0%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MIGRLRG+L EK PP ++++V G+GYEV++PM+ +Y LP++GE   ++TH VVREDA LL
Sbjct: 1   MIGRLRGSLAEKQPPHLVLDVNGVGYEVEVPMTTLYRLPHVGETVTLHTHLVVREDAHLL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           YGF    ER LFRE+I+ NGVGPK+ LA++SG+  ++ V CV+ +D S L ++PGVGKKT
Sbjct: 61  YGFYEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSALTRIPGVGKKT 120

Query: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPVIAQNAQEEAMSALLALGYKPPQASK 180
           AERL+VE+KDR K W A           P  + PV   +A+ +A+SAL++LGYKP +ASK
Sbjct: 121 AERLLVELKDRFKAWEALPGTFTLVSNGPNQAEPV--ASAESDAVSALISLGYKPQEASK 178

Query: 181 AVSQVAKAGMSSEELIREALKSM 203
           AVS + +  +SS +LIR ALK M
Sbjct: 179 AVSAIKEKDLSSADLIRRALKGM 201