Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., Holliday junction DNA helicase RuvA (RefSeq) from Shewanella amazonensis SB2B

 Score =  242 bits (617), Expect = 4e-69
 Identities = 123/205 (60%), Positives = 157/205 (76%), Gaps = 1/205 (0%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MIGRL+G L+EK  P++LI+VGG+GYE+QMP++  YELP  G E I+YTHFVVREDAQLL
Sbjct: 1   MIGRLKGILVEKHAPEVLIDVGGVGYELQMPLTSFYELPLPGAEVIVYTHFVVREDAQLL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           YGF    ER+LFR +IKANGVGPK+ L ILSGMTA +F+ C+E++DI+TLIKLPGVGKKT
Sbjct: 61  YGFIHKEERSLFRLLIKANGVGPKLALTILSGMTAKEFIGCLERDDIATLIKLPGVGKKT 120

Query: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPV-IAQNAQEEAMSALLALGYKPPQAS 179
           AERL+VEM+D+LK      +          + TP  +A   +E+A++ALL+LGYKP QAS
Sbjct: 121 AERLLVEMRDKLKSLMEASMGAEREFVLKSNFTPAPVAATVEEDAIAALLSLGYKPQQAS 180

Query: 180 KAVSQVAKAGMSSEELIREALKSMV 204
           KAVS   + GM  E+LI+ ALKSM+
Sbjct: 181 KAVSSAFQEGMDPEQLIKAALKSML 205