Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., holliday junction ATP-dependent DNA helicase RuvA from Phaeobacter inhibens DSM 17395

 Score =  106 bits (265), Expect = 3e-28
 Identities = 78/223 (34%), Positives = 108/223 (48%), Gaps = 22/223 (9%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MIG+L G L  +    +LI+V G+GY V      +  LP  GE   +YT  VVRED   L
Sbjct: 1   MIGKLTGRLEYRSSDHVLIDVRGVGYIVYCSDRTMATLPGTGEAVALYTDMVVREDLMQL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           YGF ++ E+   R +    GVG K+ LAIL  +        +   D +T+    GVG KT
Sbjct: 61  YGFPSLMEKEWHRLLTSVQGVGAKVSLAILGTLGPEGVSRAIALGDWATVKAAKGVGPKT 120

Query: 121 AERLVVEMKDRLKG-WGAGDLFTPATD---------AAPVDS----------TPVIAQNA 160
           A+R+V+++KD+  G    G     A D          APV++           P  A  A
Sbjct: 121 AQRIVLDLKDKAPGVMAMGGTIADAMDGPGLDVVESVAPVEAGKTPRKAPPKAPSGAAAA 180

Query: 161 QEEAMSALLALGYKPPQASKAVSQVAKA--GMSSEELIREALK 201
              A+SAL  LGY P  A+ AV++ A      +  ELIR AL+
Sbjct: 181 SAGALSALGNLGYGPSDAAAAVAEAAATYPDANEAELIRAALR 223