Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 194 a.a., Holliday junction DNA helicase, RuvA subunit from Dechlorosoma suillum PS

 Score =  172 bits (436), Expect = 4e-48
 Identities = 91/204 (44%), Positives = 132/204 (64%), Gaps = 18/204 (8%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MIGRL G L EK PPQ++++V G+GYEV +PMS  Y LP  G++  + THFVVRED   L
Sbjct: 1   MIGRLTGLLAEKNPPQVVLDVQGVGYEVDVPMSTFYNLPGNGDKVTLLTHFVVREDGHFL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           +GF T +ER  FR++IK +GVGP+M LAILSG++ +     + +++   L K+PG+GKKT
Sbjct: 61  FGFLTEAERFAFRQLIKISGVGPRMALAILSGLSVSDLAAAISRQESGRLTKVPGIGKKT 120

Query: 121 AERLVVEMKDRLK---GWGAGDLFTPATDAAPVDSTPVIAQNAQEEAMSALLALGYKPPQ 177
           AERL++E+KD+L    G GA              +  ++  + Q + ++ALLALGY   +
Sbjct: 121 AERLLLELKDKLAPVVGGGA--------------AAALVVHDDQSDILNALLALGYNERE 166

Query: 178 ASKAVSQVAKAGMSSEELIREALK 201
           A+ A+ Q+  AG    + IR+ALK
Sbjct: 167 AAAALKQL-PAGSGVSDGIRQALK 189