Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., Holliday junction ATP-dependent DNA helicase RuvA from Marinobacter adhaerens HP15

 Score =  213 bits (543), Expect = 2e-60
 Identities = 113/209 (54%), Positives = 147/209 (70%), Gaps = 7/209 (3%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MIGR+RG L+EK P Q L+E  G+GYEV +P +  + LP  G+E  ++THF VREDAQ L
Sbjct: 1   MIGRIRGILVEKAPGQALVECAGLGYEVDIPYTTFFHLPETGDEVTLHTHFAVREDAQSL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           YGF +  +R LFR +IK NGVGPK+ + ILSG+ A QF+ CVE  D ++L+KLPGVGKKT
Sbjct: 61  YGFASSLDRDLFRLLIKVNGVGPKLAVGILSGLDAQQFIRCVENRDSASLVKLPGVGKKT 120

Query: 121 AERLVVEMKDRLKGWGAGDLFTPATDAA-----PVDSTPVIAQNAQEEAMSALLALGYKP 175
           AERL++EM DR+ G   G  F P +  A     P    P     A EEA +AL+ALGYKP
Sbjct: 121 AERLLIEMADRI-GQLEGQ-FVPTSPEATGVGQPGGQGPAGGPVATEEAEAALIALGYKP 178

Query: 176 PQASKAVSQVAKAGMSSEELIREALKSMV 204
            +A+KA+S+VA+ GMSSE LIR AL++M+
Sbjct: 179 QEAAKAISKVAEEGMSSETLIRLALRNMI 207