Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 203 a.a., Holliday junction branch migration protein RuvA from Klebsiella michiganensis M5al

 Score =  260 bits (665), Expect = 1e-74
 Identities = 125/202 (61%), Positives = 162/202 (80%), Gaps = 1/202 (0%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MIGRLRG ++EK PP +L+E GG+GYEV +PM+C YELP++G+EAII+THF+VREDAQLL
Sbjct: 1   MIGRLRGIILEKQPPLVLLETGGVGYEVHLPMTCFYELPDVGKEAIIFTHFIVREDAQLL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           YGFN   ER LF+E+IK NGVGPK+ LAILSGM+A QFV  VE+E+++ L+KLPG+GKKT
Sbjct: 61  YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREELAALVKLPGIGKKT 120

Query: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPVIAQNAQEEAMSALLALGYKPPQASK 180
           AERL+VEMKDR KG   GDLFTPA D            +A++EA++AL+ALGYKP +AS+
Sbjct: 121 AERLIVEMKDRFKGL-HGDLFTPAADLVLTSPAGPSDDDAEQEAVAALVALGYKPQEASR 179

Query: 181 AVSQVAKAGMSSEELIREALKS 202
            VS++ +   +SE LIREAL++
Sbjct: 180 MVSKIVRPDANSETLIREALRA 201