Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., Holliday junction DNA helicase RuvA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 87.4 bits (215), Expect = 2e-22
 Identities = 66/186 (35%), Positives = 95/186 (51%), Gaps = 9/186 (4%)

Query: 1   MIGRLRGTLIEKLPPQ-ILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQL 59
           MI  + G L E      +++  GG+GYEV +P   +  LP+ G     +    VREDA  
Sbjct: 1   MIAYVEGRLAEVAGNACVVVTDGGVGYEVFVPGHTLARLPDKGGRVSFFISTEVREDALE 60

Query: 60  LYGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKK 119
           LYGF T  ER  F  +   + VG K GLAILS    +     V ++D+  L ++ G+GKK
Sbjct: 61  LYGFATWDERQTFIVLTSISKVGAKTGLAILSQFRPDDLRRLVVEDDVLALTRVSGIGKK 120

Query: 120 TAERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPVIAQNAQEEAMSALLALGYKPPQAS 179
           TA+ + +E+K +LK     DL  PA  AAP+  T         +A++ L  LGY   +AS
Sbjct: 121 TAQHIFLELKYKLK---VEDL--PA--AAPL-VTGGAPGGVFRDALAGLANLGYGEEEAS 172

Query: 180 KAVSQV 185
             +  V
Sbjct: 173 HVLKDV 178