Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., Holliday junction DNA helicase RuvA (RefSeq) from Shewanella sp. ANA-3

 Score =  246 bits (629), Expect = 2e-70
 Identities = 126/205 (61%), Positives = 158/205 (77%), Gaps = 1/205 (0%)

Query: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60
           MIGRLRG LIEK  P++LI+V G+GYE+QMP++  YELP + +   +YTHFVVREDAQLL
Sbjct: 1   MIGRLRGVLIEKQAPEVLIDVNGVGYELQMPLTSFYELPEVNQPTTVYTHFVVREDAQLL 60

Query: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120
           YGF T  ER+LFR +IKANGVGPK+ L ILSGMTA++FV CVE++DI TL+KLPGVGKKT
Sbjct: 61  YGFITKQERSLFRLLIKANGVGPKLALTILSGMTASEFVGCVERDDIVTLVKLPGVGKKT 120

Query: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPVIAQN-AQEEAMSALLALGYKPPQAS 179
           AERL+VEM+D+LK      + +        + +P    N A+E+A+SAL++LGYKPPQAS
Sbjct: 121 AERLLVEMRDKLKSLMEASVGSEREFVLQSNYSPAPTVNSAEEDAISALISLGYKPPQAS 180

Query: 180 KAVSQVAKAGMSSEELIREALKSMV 204
           KAVS   K GM SE LI+ ALKSM+
Sbjct: 181 KAVSAAYKEGMDSETLIKAALKSML 205