Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., FIG065221: Holliday junction DNA helicase from Pseudomonas fluorescens FW300-N2E2

 Score = 63.9 bits (154), Expect = 7e-15
 Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 27/222 (12%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGVN 84
           +R   L +Y GQ+HV  + +   +A  + Q AL  ++ +GPPG+GKTTLA ++A     +
Sbjct: 17  LRATNLDEYVGQEHVLARGKPLREA--LEQGALHSMIFWGPPGVGKTTLARLLAEVSDAH 74

Query: 85  IRTTSGPV-----LEKAGDLAALLT-NLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLD 138
             T S  +     + +A ++A        +  +LF+DE+HR +   ++   P +ED  L 
Sbjct: 75  FETVSAVLAGVKEIRQAVEVAKQQAGQYGKRTILFVDEVHRFNKSQQDAFLPYVEDGTL- 133

Query: 139 IMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEYYKVADLQHIVQRS 198
           I IG          + P F L  A           R R  +++ L+   +  L H     
Sbjct: 134 IFIG-------ATTENPSFELNNALLS--------RARVYVLKSLDEAAMRKLVHRALTE 178

Query: 199 AQCLG---LSMDSEGALEVARRARGTPRIANRLLRRVRDYAE 237
            + LG   LS+  EG   +   A G  R    LL    D AE
Sbjct: 179 ERGLGKRHLSLSDEGFQILFSAADGDGRRLLNLLENASDLAE 220