Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., FIG065221: Holliday junction DNA helicase from Pseudomonas fluorescens FW300-N1B4

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 27/222 (12%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGVN 84
           +R   L +Y GQ+H+  + +   +A  + Q AL  ++ +GPPG+GKTTLA ++A     +
Sbjct: 17  LRATNLDEYVGQEHLLARGKPLREA--LEQGALHSMIFWGPPGVGKTTLARLLAEVSDAH 74

Query: 85  IRTTSGPV-----LEKAGDLAALLT-NLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLD 138
             T S  +     + +A ++A        +  +LF+DE+HR +   ++   P +ED  L 
Sbjct: 75  FETVSAVLAGVKEIRQAVEVAKQQAGQYGKRTILFVDEVHRFNKSQQDAFLPYVEDGTL- 133

Query: 139 IMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEYYKVADLQHIVQRS 198
           I IG          + P F L  A           R R  +++ L+   +  L H     
Sbjct: 134 IFIG-------ATTENPSFELNNALLS--------RARVYVLKSLDEAALRKLVHRALTE 178

Query: 199 AQCLG---LSMDSEGALEVARRARGTPRIANRLLRRVRDYAE 237
            + LG   L++  EG   +   A G  R    LL    D AE
Sbjct: 179 ERGLGKRQLTLSDEGFQMLLSAADGDGRRLLNLLENASDLAE 220