Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., Holliday junction DNA helicase, RuvB subunit from Pseudomonas stutzeri RCH2

 Score =  489 bits (1260), Expect = e-143
 Identities = 248/332 (74%), Positives = 286/332 (86%), Gaps = 2/332 (0%)

Query: 1   MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHL 60
           MIEADR++   S   +DE+ +DRAIRP KLA+Y GQ  VR+QM++FI+AA+ RQEALDH 
Sbjct: 1   MIEADRIVTAGSRD-RDEQ-LDRAIRPLKLAEYIGQPVVREQMDLFIRAAKGRQEALDHT 58

Query: 61  LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL 120
           LIFGPPGLGKTTLANI+A EMGV+I++TSGPVLE+ GDLAALLTNLE  DVLF+DEIHRL
Sbjct: 59  LIFGPPGLGKTTLANIIAEEMGVSIKSTSGPVLERPGDLAALLTNLEAGDVLFVDEIHRL 118

Query: 121 SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV 180
           SP+VEEVLYPAMED+QLDIMIGEGPAARSIK+DLPPFTL+GATTRAG LT+PLRDRFGIV
Sbjct: 119 SPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIV 178

Query: 181 QRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKG 240
           QRLE+Y   DL  IV RSA  LGL  + EGA E+ARRARGTPRIANRLLRRVRD+AEV+G
Sbjct: 179 QRLEFYSTEDLATIVSRSASILGLPTEPEGAFEIARRARGTPRIANRLLRRVRDFAEVRG 238

Query: 241 DGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIE 300
            G I  Q AD ALNMLDVD +GFD+ DR+LLL ++EKF GGPVGID+LAAAI EE+ TIE
Sbjct: 239 RGEITRQIADLALNMLDVDERGFDHQDRRLLLTLIEKFDGGPVGIDSLAAAISEERHTIE 298

Query: 301 DVLEPFLIQQGYLQRTPRGRIATDRAYLHFGI 332
           DVLEP+LIQQGY+ RTPRGR+ T  AYLHFG+
Sbjct: 299 DVLEPYLIQQGYIMRTPRGRVVTRHAYLHFGL 330