Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., FIG065221: Holliday junction DNA helicase from Xanthomonas campestris pv. campestris strain 8004

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 38/238 (15%)

Query: 25  IRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGVN 84
           +RP+ L +  GQ  +        +A +  +  +  ++++GPPG GKTTLA ++A+     
Sbjct: 8   MRPRTLDEMVGQKRLLAADSALRRAVESGR--VHSMILWGPPGCGKTTLALLLAHYADAE 65

Query: 85  IRTTSGPVLEKAGDLAALLTNLEE------NDVLFIDEIHRLSPMVEEVLYPAMEDYQLD 138
            +  S  VL    D+  +L    +        VLF+DE+HR +   ++   P        
Sbjct: 66  FKAISA-VLSGLPDVRQVLAEAAQRFASGRRTVLFVDEVHRFNKAQQDAFLP-------- 116

Query: 139 IMIGEGPAARSIKIDLPPFTLIGATTRAGS--LTSPL--RDRFGIVQRLEYYKVAD-LQH 193
                        I+      +GATT   S  L S L  R R  +++ +    + + LQ 
Sbjct: 117 ------------HIERGTILFVGATTENPSFELNSALLSRCRVHVLEGVSPQDIVEALQR 164

Query: 194 IVQRSAQCLG---LSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQT 248
            +  + + LG   + +     LE+A  A G  R A  LL    + A  +G G I  +T
Sbjct: 165 ALHDAERGLGQETIQVSEASLLEIASAADGDVRRALTLLEIAAELATGEG-GEITPRT 221