Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., Holliday junction DNA helicase RuvB from Sinorhizobium meliloti 1021

 Score =  401 bits (1031), Expect = e-116
 Identities = 205/332 (61%), Positives = 252/332 (75%), Gaps = 4/332 (1%)

Query: 1   MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHL 60
           M EA RLIAP     K  E +D  +RP+ L ++ GQ   R  ++IFI+AA+ R EALDH+
Sbjct: 1   MSEAARLIAPE----KRGEDLDATMRPQTLDEFTGQAEARANLKIFIEAARNRGEALDHV 56

Query: 61  LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL 120
           L  GPPGLGKTTLA I+A E+GVN R+TSGPV+ KAGDLAALLTNLEE DVLFIDEIHRL
Sbjct: 57  LFVGPPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRL 116

Query: 121 SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV 180
           +P VEE+LYPAMED+QLD++IGEGPAARS+KIDL  FTL+ ATTR G LT+PLRDRFGI 
Sbjct: 117 NPAVEEILYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIP 176

Query: 181 QRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKG 240
            RL +Y V +L+ IV+R A+ +GL M  EGA E+ARRARGTPRIA RLLRRVRD+AEV  
Sbjct: 177 VRLNFYTVEELELIVRRGARLMGLGMTDEGAREIARRARGTPRIAGRLLRRVRDFAEVAR 236

Query: 241 DGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIE 300
              +  + AD AL  L VD  G D +DR+ L  I + F GGPVGI+ +AA + E +D IE
Sbjct: 237 AEAVTLKIADEALTRLLVDSMGLDQLDRRYLTMIAQNFGGGPVGIETIAAGLSEPRDAIE 296

Query: 301 DVLEPFLIQQGYLQRTPRGRIATDRAYLHFGI 332
           D++EP+LIQQG++QRTPRGR+ T  A+ H G+
Sbjct: 297 DIIEPYLIQQGFIQRTPRGRVLTANAWKHLGL 328