Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Holliday junction DNA helicase RuvB (RefSeq) from Shewanella amazonensis SB2B

 Score =  499 bits (1285), Expect = e-146
 Identities = 255/334 (76%), Positives = 289/334 (86%), Gaps = 2/334 (0%)

Query: 1   MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHL 60
           MIEADRLI P       E+VIDRA+RPK L +Y GQD  R Q+++FI+AA+ R EALDH+
Sbjct: 1   MIEADRLIQP--QDLGQEDVIDRAMRPKLLDEYTGQDDTRAQLKVFIEAAKKRGEALDHM 58

Query: 61  LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL 120
           LI+GPPGLGKTTLANIVANEMGVNI++TSGPVLEKAGDLAALLTNLEE DVLFIDEIHRL
Sbjct: 59  LIYGPPGLGKTTLANIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEEGDVLFIDEIHRL 118

Query: 121 SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV 180
           SP+VEE+LYPAMEDYQLDIMIGEGPAARSIK+DLPPFTL+GATTRAGSLTSPLR RFGI 
Sbjct: 119 SPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRARFGIP 178

Query: 181 QRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKG 240
            RLE+Y V DL  IV RSA+ + + MD  GA E+ARR+RGTPRIANRLLRRVRD+AEVK 
Sbjct: 179 LRLEFYNVRDLSSIVARSAKVMDVPMDEGGAEEIARRSRGTPRIANRLLRRVRDFAEVKH 238

Query: 241 DGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIE 300
           DG I    A  AL++LDVD +GFDYMDRKLLLAI++KF GGPVG+DNLAAAIGEE++TIE
Sbjct: 239 DGAISRAVAQSALDLLDVDSEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIE 298

Query: 301 DVLEPFLIQQGYLQRTPRGRIATDRAYLHFGIEK 334
           DVLEPFLIQQG++QRTPRGRIAT RAY HF + K
Sbjct: 299 DVLEPFLIQQGFVQRTPRGRIATARAYSHFDLIK 332