Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., AAA ATPase, central region (NCBI) from Rhodospirillum rubrum S1H

 Score = 57.4 bits (137), Expect = 7e-13
 Identities = 69/251 (27%), Positives = 107/251 (42%), Gaps = 39/251 (15%)

Query: 25  IRPKKLADYQGQDH-VRDQMEIFIQAAQMRQEALDHLLIFGPPGLGKTTLANIVANEMGV 83
           +RP++LA+  GQDH V     +    A  R   L  ++++GPPG GKTT+A ++A+   +
Sbjct: 18  LRPRQLAEVVGQDHLVGPDGPLGRMTAAHR---LASVVLWGPPGCGKTTIARLLADSTDL 74

Query: 84  NIRTTSGPVLEKAGDLAALLTNLEE------NDVLFIDEIHRLSPMVEEVLYPAMEDYQL 137
           +    S  V     DL  + T   E        +LFIDEIHR +   ++   P +ED  +
Sbjct: 75  HFEPLSA-VFAGVADLRKIFTAARERRTVGRGTLLFIDEIHRFNRAQQDGFLPYVEDGTV 133

Query: 138 DIMIGEGPAARSIKIDLPPFTLIGATTRAGS--LTSPLRDRFG--IVQRLEYYKVADLQH 193
                                L+GATT   S  L + L  R    +++RL+   +  L  
Sbjct: 134 --------------------VLVGATTENPSFELNAALLSRCQVLVLRRLDDAALETL-- 171

Query: 194 IVQRSAQC-LGLSMDSEGALEVARRARGTPR-IANRLLRRVRDYAEVKGDGHICAQTADR 251
           I +  A+C   L + +EG   +   A G  R + N     +   AE   D    A+   R
Sbjct: 172 IARAEAECGRSLPLSAEGRETLRALADGDGRYLLNLAEELIALPAEPLLDAAGLARVVQR 231

Query: 252 ALNMLDVDHQG 262
                D D +G
Sbjct: 232 RAPQYDKDREG 242